| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0818 |
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| Symbol | |
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| ID | 3723099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 965363 |
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| End bp | 968293 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637750412 |
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| Product | EAL and GGDEF domain-containing protein |
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| Protein accession | YP_356245 |
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| Protein GI | 77918430 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAC GTACCGTGCA AGTTACGGCC TTTCCCGGGA ATCGCTGTTT TCGGCGCACC
CTACTCCACA TCGTCGCCCC CTTGAGCCTA TGCCTGCTGT TTTTGGTCGT TTTACAGACA
ACCCTGCCTT TGTGGGTCAC CGTTGCACTG TGCCTCGGCT TGCTCATTCA GATGTTGGCA
GGTTGGCACG GCATGGAGGA ATATCGTCGC GGAGAACGGT TGCGGGCAGA TACACAGAGA
AACCAACTGC ACATCGAAAA TGCCATTTCA GCCATAGCCG TTCAGGAGAT CGTACTGGAC
ACCGACGGCC AGGCAGTGGA CTTCATCTTT TTGAGTGCCA ACCCGGCCTT CGAAACGCAC
ACCGGCCTCA AGGTCGCGGA CATTCTCGGA CGCCGCGTCA CAGAGGTCCT TCCCGGGATT
GAAAAAACCC ATTATATTGA AAGCTTCGGC AAGGTGGCTC TGACCGGCGA GGTGCTTATC
TTCGAAGAGT ATTCCGACCT GCTGGGCAGG CACTTCCGCA TCCATGCCTA CCCCCTGGGC
GAGAAGTGTT TCGCCACGAT GTTTAGCGAT ATCACCGAAT CCCATAATGC CAAAGAAGCG
TTGCAGGAAA ACCAATCTCT TATACAGTCG CTGCTGCGAA GCATGCAGGA TCTGGTTTTC
GTCCTCGACA CGGATCTTGT TTTTCAAACC TATCACCAAC CCGCCTGCGG AAAACTTTTC
GTCCTCCCCG AGCAGTTCAT CGGCAAACAC CTCGATGAGG TAAATCTTCC TGAAGAGGTT
GTCCAGGCTA CAAAAACAGC ACTGGAGCAT ACTCTCACCA CCGGCACCGT CACGCACACG
GAATACTGGC TCGACCTCCC GGACGGACGG ACCTGCTTCG ACATGTGCAT AAGCCCCTAT
CGCGCGCAAA ATCGTCAGAT CAAGGGCCTG ACCTGCGTTG CACGCGATAT CACCGAACGC
AAACAGGCGG AAGAGACCCT CGAAAAACGC ATCCAGGCTC TGACCCGGCC GCTGCACGAT
GCTGCGGAAA CCACCTTTGA AGAGTTGTTC AATCTGAAGG ATATCCAGCA ATTGCAGGCC
GATTTCGCTC AGGCGACCGG CGTTGCAGCC ATCATCACGC AACCGGACGG CACGGCCATC
ACCGCACCGA GTAATTTCGG TCGTCTTTGC AAGGATATCA TTTGCAAAAC AGCCAAGGGA
CAAGCCAATT GCCGGCATTC CCGTGCCCTG TTGGGCCAGC CATCCAACCA GGCACCGACC
ATTCGCACAT GCTTTAGCGC CGGGCTATGG GAGGCGGGCG CAGCCATATT GGCCGGCGAG
CATCACATCG CCAACTGGCT GGTGGGACAG GTTCGCGACA AAACTCAAAG CGAAGAACAG
ATGCGCGCTT ACGCCCGGAA AATCGGGGCC GATGAAACCG TTACCATCGA AGCCTTTCGC
GAAGTACCCG CCATGACTCG CCAGCAATTC GCGAAAGTGG CCCAGGCTCT GTATTCCATG
TCCAGGCATT TGTCGGTTTC CGCTTACCAG AATATGCTGC AGGCACGCTT TATCAGCGAG
CAGAATAAAG CGCAGAAAAA GATCGCCTAT CTGGCTCATT ACGATCAACT CACGGGATTA
GCCAATCGCA GTCTGCTAAA AGAGCGATTT GACTACGCCG TCCGGCACGC CATGCGCTCC
GGTTCCCAGG TAGCCCTTTG CCTTCTCGAT CTGGACGGCT TCAAAGCCAT CAACGATCTG
CAGGGCCACC ATGTCGGCGA TCAGTTGCTG TGCGAGGTGG CCAAACGGCT GCAAACCTCG
ATCCGCTCCA CAGATATGGC GGCCCGCATC GGCGGAGACG AATTCGTCAT ACTGTTTACG
GATATGCAGA AAACCAGCGT TGCCACAACC TTGGTTCAAA AAGCCATGAG CTGTTTCACT
TCGGCTTATG ACTTACAGGA GCATACCCAC ACCATAACCG CCAGCATGGG CGTGGCGATT
TTCCCTGAGG ATGGTCACGA TTTTCCAACC TTGTTCAAAC ATGCCGATGC GGCCATGTAT
TTTGCCAAAG AGTCCGGCCG CAACGGCGTC CAGTTTTTCC GGCAGGAGAT CGGTCAGCGG
GTACAGAATC GCCTGACCAT GGAAACGGAA TTGCGTCAGG CCCTGCAAGA AGATCAACTG
GAACTACACT ACCAACCCAT CTGGCAACTC ACTGAAAAAT GTATCGTTGG TCTGGAAGCC
CTGGTGCGCT GGCGACATCC GCAAAAAGGA CTGCTCCCGC CCGACCGGTT CATTCCCATA
GCCGAGGAGT CCAACCTCAT CCAGGCCCTG GGCCAATGGG TTCTCAATGC GGCCTGTCGG
GACATGCGTA GCTGGCGCAA TCAGGGATTT GAGAGTTTGC CGGTCTCCGT CAACATTTCC
GCCCGCCAAC TCTTCCACGA CGATTTCACC TCCTCTCTTG CCCGGCTGCT GAAAGAGTAT
GCCCTGCCCC CCGAGCAGTT GGAACTGGAG GTAACGGAGA CCATCTTCCT GCAAAAAGAC
ACCACAGTGG AAAAAGTAAT GAACCATCTC AAGAATATCG GGGTGGGGCT TGTGCTGGAC
GATTTTGGCA CCGGGTATTC GAGCCTCAGT TACCTCAATC GTTTTCATAT CGACAAACTG
AAAATCGACC GGTCGTTCAT GGCGCATATC TGTCAAAAAG AGCAGGATGC CATTCTGACG
GCCACTATCA TTCGCATGGC CCAGAGCCTG GGCATGCAGG TCGTTGCCGA GGGCGTAGAA
ACCGCCGGTC AGGAACTGTT CCTGATGGAG CAGGGATGTG ACCTGGCCCA GGGATATTTT
TACTACAAAC CCCAACCGAT AGAATCTCTC CGGGATATCT TTGTCCAGAA CAAGCTGTGC
TCCCGGGCAC TGGAAGATCC CGAGCAACCC ATGCCGCAAC CCTCGGCATA G
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| Protein sequence | MRKRTVQVTA FPGNRCFRRT LLHIVAPLSL CLLFLVVLQT TLPLWVTVAL CLGLLIQMLA
GWHGMEEYRR GERLRADTQR NQLHIENAIS AIAVQEIVLD TDGQAVDFIF LSANPAFETH
TGLKVADILG RRVTEVLPGI EKTHYIESFG KVALTGEVLI FEEYSDLLGR HFRIHAYPLG
EKCFATMFSD ITESHNAKEA LQENQSLIQS LLRSMQDLVF VLDTDLVFQT YHQPACGKLF
VLPEQFIGKH LDEVNLPEEV VQATKTALEH TLTTGTVTHT EYWLDLPDGR TCFDMCISPY
RAQNRQIKGL TCVARDITER KQAEETLEKR IQALTRPLHD AAETTFEELF NLKDIQQLQA
DFAQATGVAA IITQPDGTAI TAPSNFGRLC KDIICKTAKG QANCRHSRAL LGQPSNQAPT
IRTCFSAGLW EAGAAILAGE HHIANWLVGQ VRDKTQSEEQ MRAYARKIGA DETVTIEAFR
EVPAMTRQQF AKVAQALYSM SRHLSVSAYQ NMLQARFISE QNKAQKKIAY LAHYDQLTGL
ANRSLLKERF DYAVRHAMRS GSQVALCLLD LDGFKAINDL QGHHVGDQLL CEVAKRLQTS
IRSTDMAARI GGDEFVILFT DMQKTSVATT LVQKAMSCFT SAYDLQEHTH TITASMGVAI
FPEDGHDFPT LFKHADAAMY FAKESGRNGV QFFRQEIGQR VQNRLTMETE LRQALQEDQL
ELHYQPIWQL TEKCIVGLEA LVRWRHPQKG LLPPDRFIPI AEESNLIQAL GQWVLNAACR
DMRSWRNQGF ESLPVSVNIS ARQLFHDDFT SSLARLLKEY ALPPEQLELE VTETIFLQKD
TTVEKVMNHL KNIGVGLVLD DFGTGYSSLS YLNRFHIDKL KIDRSFMAHI CQKEQDAILT
ATIIRMAQSL GMQVVAEGVE TAGQELFLME QGCDLAQGYF YYKPQPIESL RDIFVQNKLC
SRALEDPEQP MPQPSA
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