| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0810 |
|---|
| Symbol | |
|---|
| ID | 3723091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 955038 |
|---|
| End bp | 956486 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637750404 |
|---|
| Product | site-specific recombinase/integrase |
|---|
| Protein accession | YP_356237 |
|---|
| Protein GI | 77918422 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.0879139 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTCCA TGTATTTAGC GCAAAACGGG CGGGATGTCA ATCTCTTTCG GGGAGGAGGG
GAGGATGGAG AAAGCCATGT TTTTCAAGGG CCGGAGAGGG AAGTTGCGCA TCGGCGGAAG
AGGGCAGAGG GTTTTGCGTA TTTTTTCGAG GGAATAGAAA GGTCGAGAGA ATTCTCAGAG
CATTTTGCGG ACCGCAGATG GACCGCCGAA AGCATGGTAT CAGTTCCATC GAAAAAATGT
CCCCGGAGGA GGAGAACTAT GGCGAACACG AACCGATCCA TTCCACTGAC CAAAAAGGCC
ATCGACGGCC TTCCGTCCCA CGATCCAGCC GGAACACAGG CTACGGCCAC GGAGTATTCG
ACCGGCGAAC CGGGCCTGCA TATCTGCGTC AACATGCGGG GCAATAAGCG CTGGCTGTTC
CGCTACCGGC TCTACGGGCG GAAGAAGGTC GTCGCCATCG GACCCTATCC GTCCATCGAG
CCCCCTCTGG CCAAGCAGAT GGCCAACGAG ATGCAGCGCA ATTTGGCCCT CGGAGAACGG
GTGGTATCCC CGAGAGCGCA GCAGAAACAG CAGAAGACCT TTGGCGAGTT TGCCCGGAAG
TATCTGGAGC ACGCCAAGCA GACCAAGAAA TCGTGGAAGG ATGACTACAA TAAGCTCACC
AATCAGATTA TTCCCAAGTG GGGCGAGGTG CCGCTGACCT GCCTGACGCC GAAGGAGATC
CAGGGATATT TGAATCAGGT CAAGGCCCGC ACCTCGGGGA CCAACGCCAA CCGGCACTAT
GCCGTGTTGA ATGTCCTCTA CAATCTGGCG GTGAAGTGGG GCGAAATCGA CCCGTGGAAG
AACCCGATGC CTGGGGTGTC CAAGTTTAGG GACAATCCGG GACGGACGCG CTACCTGAGC
ATGGAGGAGT GTAAGCGGTT CCTGGCGGCC CTGGAGGAGG CGCCTGGTCA GCTAGCGGCC
TGTGCCCTGA GATTGCTTCT GTTCACGGGT TGCCGTGCGG GGGAGGTACT CAAGAGCAAA
TGGGAGGATG TGTCCATGGA GGGGCGGACC ATGCTTCTTC CCGAGACAAA AAACGGCAAG
TCGCGGGTGG TCCATCTCAA TTCGCTGAGT CTTGCCGAGA TCGAGAAGCT CAAGGACTTC
CGGAACCCTA GCAATCCCTA TCTGTTCCCC GGGAGTTCGG AGGATAAGCC GCTGGGGACG
GTGCGCAAGA CCTTCGAGCA CGCGCTGAAG CTGGCGGGGT TGCAGGGGAC GGATGTGGTC
ATCCACACCC TGCGCCACAC CCATGCCAGT CTGTTGGCCA ACCTGGGGGA ATCGCTGGAG
ACGATCAAGG TAAGTCTGGG GCACAGCTCG GTTAAAATGA CCGAGAGGTA TGCCCATATT
TCCGGTAGCA AAACCAAGGA CGCTTCGGAC CATCTGGCCG AGCAGTTAAA AGAGGTGATG
AATCAGTAA
|
|---|
| Protein sequence | MRSMYLAQNG RDVNLFRGGG EDGESHVFQG PEREVAHRRK RAEGFAYFFE GIERSREFSE
HFADRRWTAE SMVSVPSKKC PRRRRTMANT NRSIPLTKKA IDGLPSHDPA GTQATATEYS
TGEPGLHICV NMRGNKRWLF RYRLYGRKKV VAIGPYPSIE PPLAKQMANE MQRNLALGER
VVSPRAQQKQ QKTFGEFARK YLEHAKQTKK SWKDDYNKLT NQIIPKWGEV PLTCLTPKEI
QGYLNQVKAR TSGTNANRHY AVLNVLYNLA VKWGEIDPWK NPMPGVSKFR DNPGRTRYLS
MEECKRFLAA LEEAPGQLAA CALRLLLFTG CRAGEVLKSK WEDVSMEGRT MLLPETKNGK
SRVVHLNSLS LAEIEKLKDF RNPSNPYLFP GSSEDKPLGT VRKTFEHALK LAGLQGTDVV
IHTLRHTHAS LLANLGESLE TIKVSLGHSS VKMTERYAHI SGSKTKDASD HLAEQLKEVM
NQ
|
|---|
| |