| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0796 |
|---|
| Symbol | |
|---|
| ID | 3723115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 942182 |
|---|
| End bp | 943789 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637750390 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_356223 |
|---|
| Protein GI | 77918408 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCTG AAAAAGGGAA AAAAACACCG GACGATATTT TGCTTGAACT TACGGAAGAC
ATTTTTCGGT TCCATACCCC GGAAAAGCTT CCTTGCGCCA TCTTCGAAAG GGAAGGACAC
CGGGAAACGC ACAGGATCGA ATCCAAAACA TTTGCTTACT ATCTGTGCAA TATATACCTG
CGCGAAACGG GTCGGGCGAT TCCTCAAGGA TCCCTGGATA CGGTCGTACG TCAACTTGCG
GCCCAAGCGA TTCACAATGG ACCCGAAATA CCTGTCTTCT CTCGCGTTGC TCCATGCAAC
TCGAACGGTA TTGCCGTGGA TCTGGGAAAC AGCTCTTGGG ATTCCGTAGT CGTAACCCCC
GAGGGTTGGG GGATGGATTC GCCTCAATTC CCTTTCACAA GGACGGCAGC GATGACTGCC
CTGCCCTTTC CCGACCAATC GGGAAAAATG GAAGAACTTT GGGATTTCGT CAATGTGAGA
TCCGAAGAAG CCCGACTGCT CCTCGCAGCC TGGATCATGT GCGCATTTTT CCAGAAAATG
CCCCACCCCA TCCTGGTGCT CCAGGGTCAA CAGGGTGCGG CCAAATCCAC TACGGCGAAA
ATGCTGCTGT CCCTCGTGGA TCCCAGCGCA GTCCCTTTGC AATCGCTCCC TTCGTCGGAA
AGGGACATCC TGATCGCGGC CCAGAATTCG TGGGTTTTGG CCTTTGACAA CATTCGACGG
CTCTCTCCCG AAACTTCGGA TAGCATGTGT CGTCTATCGA CGGGCGGTGG CTTGCGGACC
CGGAAATTGT ACACGGACTG CGACGAAATC TTTTTCAACG CGACCCGACC TTTGATTTTT
ACGGGCATCT ACAACATCTG CAAAGAGCAG GATCTGTTGA GCCGCGCATT GGTCATCGAA
TTGGAGGCTA TTTCGCACCA TCAGCGAAAA ACCGAAAGCG AGTTGATGGC CCGTTTTGAG
GAAGCGCGTC CGCGCATTTT CGGAGGCATT CTGACAGCCC TCAGCGGAGT CTTGCGCGAA
CTCCCGCAGG TTCATCTTTC CAGCGCTCCT CGTATGGCCG ATTTTGCGAA GATCGGGGTC
GCATTGGAGC AGGCGATGGG TTTGAAACAC GGGGCGTTTT TGGAGGCCTA CGCCGCCAAC
ATCAATCAAG CCATTGGCGC TAGTCTGGAC GACGACCCGG TGGCCAAGGC TGTCATGGAT
CTGGTCACCG AAGAGGAAGA ATGGAAGGGC ACTGCTTCAC GACTTCTCAA AGCCCTGAGC
CGTTTTGTCT CCACCGAAGC GAAAAGATCG TCGGATTGGC CCAAAGCGCC CAATCGCCTC
TCCAACCACT TGCGCCGTCT GGCTCCCGGA CTGGCTGCGG CAGGTATCGA TGTATCATTC
GACCAGAACA TCGGCGGGGA AAAGCGCGTA ATCGGCATAG CGCCAAAAAT CGGGGAAGAA
ATGGAGCAGG AGCAACCTCC GGTACCGGCC GCCGAAGTAC GTATCGAACC TGGAGCGTCC
GGTGAAAACC TTGAAAATAC TGACACTTCC GAACCGACGG CCGAAACCAC CGATGATTGT
CTTCCAAAAA TAGCTAAAAA ATTCAGCTTA GAAGACTTCA AATTGTAA
|
|---|
| Protein sequence | MGAEKGKKTP DDILLELTED IFRFHTPEKL PCAIFEREGH RETHRIESKT FAYYLCNIYL
RETGRAIPQG SLDTVVRQLA AQAIHNGPEI PVFSRVAPCN SNGIAVDLGN SSWDSVVVTP
EGWGMDSPQF PFTRTAAMTA LPFPDQSGKM EELWDFVNVR SEEARLLLAA WIMCAFFQKM
PHPILVLQGQ QGAAKSTTAK MLLSLVDPSA VPLQSLPSSE RDILIAAQNS WVLAFDNIRR
LSPETSDSMC RLSTGGGLRT RKLYTDCDEI FFNATRPLIF TGIYNICKEQ DLLSRALVIE
LEAISHHQRK TESELMARFE EARPRIFGGI LTALSGVLRE LPQVHLSSAP RMADFAKIGV
ALEQAMGLKH GAFLEAYAAN INQAIGASLD DDPVAKAVMD LVTEEEEWKG TASRLLKALS
RFVSTEAKRS SDWPKAPNRL SNHLRRLAPG LAAAGIDVSF DQNIGGEKRV IGIAPKIGEE
MEQEQPPVPA AEVRIEPGAS GENLENTDTS EPTAETTDDC LPKIAKKFSL EDFKL
|
|---|
| |