Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0769 |
Symbol | hemE |
ID | 3976402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 913009 |
End bp | 914040 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637750364 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_356198 |
Protein GI | 116878447 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.000000649218 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCCTG AGGACTACGA TTTCATCAAT GCCTGTTATG GCCGACCGGT AACGCGCACC CCGGTATGGT TGATGCGGCA GGCCGGTCGT TATCTGCCCC AATATCGCAA GATCCGGGAG CGGGTAAAAT TTCTGGAATT ATGCAAAACG CCGGAACTGG CTGCCGAAGT GACTTTGCAG CCCGTTGACG CCTTGGGCGT CGATGCCGCC ATACTGTTTT CCGATATTCT CATTCCTATC GAAGCTATGG GGCAGAACCT GTTTTATCGG CCGGCCCCTG TGCTGGAGCC GCCGGTGCGC ACTGCGGCGG ATGTGGAAGC GTTGCGCGTG CTGCAGCCGG AGCAGGATGT TCCCTTTGTG CTGGAGACCA TCCGCCTGTT GCGGCGGGAG CTGGACGGTC GCGTTCCCCT GATCGGGTTT GGCGGCGCGC CTTTCACCCT GGCCTGTTAT ATGGTGGAAG GCGCCGGCAG CCGGCATTTC CTGGCCCTTA AACGTCTCAT GTATCAAGCC CCCGAGACCT ACGCCCGGCT GATGGACAAG ATCACCGATA CCAGCATAGT CTACCTGCGG GCCCAGGCCG AGGCCGGTGC CCAGGCTCTG CAGGTTTTCG ACAGCTGGGG AGGTATCCTT TCGCCTGCCG ATTACCAGCG TTACGTGTTG CCTTACAGCC GTCGTCTGCT GTCTGCACTG GGGGATTTCG GGATTCCCCT GATCCACTTC GTCAAAGGGG CCGGTGCCAT GCTCGATCTG GTTGCCATGG CCGGTGGACA GGTCGTGGGA CTGGACTGGT GTACCTCTTT GAACCGTGCC AGGGATATCC TCGGCAACGG TATGGCGGTG CAGGGCAATC TCGATCCATC GGTATTGCTG GGCGCGCAAG ATATCATTGA GCGCGAAGTG CGGCGCATTC TGGATGAAAA TGCCGGACGC CCCGGCCACA TCTTTAATCT CGGTCACGGT ATTCTGCCGG AGGTGCCACC GGAGAACGCC GCCTTTCTGG TCGATTGCGT ACACCGTTTG ACCCAAAGCT GA
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Protein sequence | MMPEDYDFIN ACYGRPVTRT PVWLMRQAGR YLPQYRKIRE RVKFLELCKT PELAAEVTLQ PVDALGVDAA ILFSDILIPI EAMGQNLFYR PAPVLEPPVR TAADVEALRV LQPEQDVPFV LETIRLLRRE LDGRVPLIGF GGAPFTLACY MVEGAGSRHF LALKRLMYQA PETYARLMDK ITDTSIVYLR AQAEAGAQAL QVFDSWGGIL SPADYQRYVL PYSRRLLSAL GDFGIPLIHF VKGAGAMLDL VAMAGGQVVG LDWCTSLNRA RDILGNGMAV QGNLDPSVLL GAQDIIEREV RRILDENAGR PGHIFNLGHG ILPEVPPENA AFLVDCVHRL TQS
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