Gene Pcar_0740 details

Gene Information

• Locus tag: Pcar_0740
• ID: 3722946
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 879435
• End bp: 879821
• Gene Length: 387 bp
• Protein Length: 128 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637750331
• Product: DNA uptake/competence protein
• Protein accession: YP_356169
• Protein GI: 77918354
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1555] DNA uptake protein and related DNA-binding proteins
• TIGRFAM ID: [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region; [TIGR01259] comEA protein

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 5.4977199999999995e-21
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAATAA ACGATAACCC TGCTGATTTT CACGGCATGC GGGGAGCGGT CTGTCGCATT 
CAACTACTGT TAGGAGATGC TATGAAAATT CTGGTAAACT GTTTGATCAT GATGGTGTGT 
TTGCTCGCTT TAAGTCCATC GGTTGGGTAT TCCGGGGAAA TTTCGGCTGC AACGGCATCA 
GAAATAGCAA CTACAGCCGT ATCGCTTAAC TCCGCCACAG CGAAACAGTT GCAAATTTTA 
CCCGGGATCG GGGCTGTAAC CGCTGACAGA ATTGTAGCCT ACCGTAAAGC ACACGGGCCT 
TTCGCCAACG TGGAAGACCT TCTTCATGTC AAAGGGATTG GTACGCAGAC CCTGTCCAAG 
ATTCGTGATC GGATAGTGCT GAACTGA 

 

Protein sequence

MLINDNPADF HGMRGAVCRI QLLLGDAMKI LVNCLIMMVC LLALSPSVGY SGEISAATAS 
EIATTAVSLN SATAKQLQIL PGIGAVTADR IVAYRKAHGP FANVEDLLHV KGIGTQTLSK 
IRDRIVLN