Gene Pcar_0734 details

Gene Information

• Locus tag: Pcar_0734
• Symbol: trpF
• ID: 3722940
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 872052
• End bp: 872678
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637750325
• Product: phosphoribosylanthranilate isomerase
• Protein accession: YP_356163
• Protein GI: 77918348
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0135] Phosphoribosylanthranilate isomerase

Plasmid Coverage information

• Num covering plasmid clones: 81
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACATAC CGAGAGTTAA AATATGTGGC ATAACCAACC TCCAAGACGC TCTGCACGCT 
GTACGCTGCG GTGCCGATGC CCTTGGTTTT GTCTTTTATG AGCGCAGCTC GCGGTGCGTT 
ACTCCGGATC AGGTCGCGAC CATCATCGCC GGACTGCCGC CGCTGGTTAC GACTGTCGGT 
TTGTTTGTCA ACCAAGCTTC TGAAGATGTT GGCCGAATCG CCGCTAACTG CGGGCTAGAT 
ATCCTGCAGC TGCACGGTGA CGAATCCCCT GAGGCCTGCC AGGCCCTGGC TCCCTACAGG 
GTTATCAAGG CCTTTCGCCT GCGCGATGCC GGTACCTTGG ATGCCATGCC TCTTTATCCC 
GTGTCCGGAG TTTTGCTGGA TGCCTGGGTG CCCGATCAAT TCGGAGGGAC CGGTCATCGC 
TGTGATTGGG GGCTGGCTTC TCAGGTTGCC CAAAAGCAGC CCACTATTCT TGCGGGGGGG 
CTTGACCCGG ATTGCGTAGC CGATGCCGTT CGAACGGTTC AGCCGTACGC TGTCGATGTG 
TCGAGCGGGG TGGAGCGCGC TCCCGGCATC AAGGACCCTG ACAAAGTCGC TGCATTTATT 
CATAACGCAA AGTGCGCCGC CGTCTGA 

 

Protein sequence

MNIPRVKICG ITNLQDALHA VRCGADALGF VFYERSSRCV TPDQVATIIA GLPPLVTTVG 
LFVNQASEDV GRIAANCGLD ILQLHGDESP EACQALAPYR VIKAFRLRDA GTLDAMPLYP 
VSGVLLDAWV PDQFGGTGHR CDWGLASQVA QKQPTILAGG LDPDCVADAV RTVQPYAVDV 
SSGVERAPGI KDPDKVAAFI HNAKCAAV