Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0727 |
Symbol | rpsD |
ID | 3723316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 865700 |
End bp | 866329 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637750318 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_356156 |
Protein GI | 77918341 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGCTAGAT ATACTGGGCC TGTCTGCCGC TTGTGCAGAA GAGAAACTAT GAAGCTGTTC CTTAAGGGGG ACAGGTGTTA TACAGATAAA TGCGCTCTGG AACGGCGCAA CTATGCGCCT GGTCAGCATG GCCAGGGCCG CACCAAGGTT TCCGATTACG GAACGCAGTT GCGTGAAAAG CAGCGTATGA AACGTACATA CGGTTTGCTG GAAAAACAGT TCCGCGCCTA TTTCGATAAA GCGGATAGTA TGAAGGGTGT GACCGGCGAG AATCTTCTGG TTCTGCTCGA GCGTCGTCTG GACAGTGCCG TTTACCGTCT CGGGTTCGCG AGTTCCCGTA CGGAAGGCCG TGCTCTGGTT CGTCAGGGGC ATTTCCTGGT CAACGGACGC AAAGTCAACA TTCCTTCTTA TGTCATGCGT CCCAACGATG TGATCGAATT GCGCGAGAAG AGCCGCAAGA TCACTCGTAT CAATGATGCG TTGGACGGTG TCATGCGACG CGGCCTGCCT TCCTGGGTTG AGCTTGATCG TGAAGCCTTC AAGGGCACCT TCAAGACTCT GCCGGTGCGC GAGGAAATGA CCACGCCTGC CTTCCAGGAG CAGCTGATCG TCGAACTGTA CTCCAAGTAA
|
Protein sequence | MARYTGPVCR LCRRETMKLF LKGDRCYTDK CALERRNYAP GQHGQGRTKV SDYGTQLREK QRMKRTYGLL EKQFRAYFDK ADSMKGVTGE NLLVLLERRL DSAVYRLGFA SSRTEGRALV RQGHFLVNGR KVNIPSYVMR PNDVIELREK SRKITRINDA LDGVMRRGLP SWVELDREAF KGTFKTLPVR EEMTTPAFQE QLIVELYSK
|
| |