Gene Pcar_0720 details

Gene Information

• Locus tag: Pcar_0720
• Symbol: rplO
• ID: 3723309
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 861519
• End bp: 861962
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637750311
• Product: ribosomal protein L15
• Protein accession: YP_356149
• Protein GI: 77918334
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 50
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCTGA GTAATCTGCG GCCGGCTATC GGCTCTACAA AGAATCGGAA GCGCATCGGA 
CGTGGACCCG GTTCTGGTAA CGGTAAAACC GCCGGTAAGG GCCATAAGGG TCAGAATGCT 
CGTAGTGGTG GTGGTGTGAA GCCCGGTTTT GAAGGTGGAC AGATGCCTTT GCAGCGTCGA 
CTGCCGAAAC GTGGTTTCAA ATCGTTGAAT AAAAAGGTTT ACGCTCTGGT TAACCTTCGT 
GACCTGCAGG ATATTTTTGA AGCTGGCAGT GTCGTGGACA TTGAGGCTCT TGGCCAGAAT 
GGCCTTGTTA GCCGTATCTA CGATGGGATC AAAATCCTTG GGGATGGCGA TCTCGATAAA 
GCTTTGACTG TAAAAGCTCA TAAATTCAGT CAGTCTGCCA TTGCAAAAAT CGAAGCTGCT 
GGTGGGAAAG CTGAGGTAAT CTAA 

 

Protein sequence

MDLSNLRPAI GSTKNRKRIG RGPGSGNGKT AGKGHKGQNA RSGGGVKPGF EGGQMPLQRR 
LPKRGFKSLN KKVYALVNLR DLQDIFEAGS VVDIEALGQN GLVSRIYDGI KILGDGDLDK 
ALTVKAHKFS QSAIAKIEAA GGKAEVI