| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0707 |
|---|
| Symbol | rpsC |
|---|
| ID | 3723392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 856356 |
|---|
| End bp | 856988 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637750298 |
|---|
| Product | 30S ribosomal protein S3 |
|---|
| Protein accession | YP_356136 |
|---|
| Protein GI | 77918321 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0092] Ribosomal protein S3 |
|---|
| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00000000000377493 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGCCAGA AAGTACATCC GATAGGATTT CGACTGGGAG TCGTTAAGAC CTGGAGCTCC
CGGTGGTACG CTGAGGGGGA ATACTCTCAG CTTCTGCACG AGGATATAAA GCTTCGTAAC
TATCTTAAAA AACGTCTTTA TCACGCCGGT GTCGCCAAGA TTGAGCTGGA GCGTGCAGCG
AGTAAAGCCA AAATTAACGT TTACGCCGCT CGCCCGGGCA TTATCATCGG TAAAAAAGGG
GCTGAGGTTG AAGCCCTTAA AAAAGATCTG GCCCGGCTCA CCGATAAAGA AGTCTTTATA
AACATCCAGG AAGTCCGTAA GCCCGAAATT GACGCGCAGC TGGTTGCTGA AAACGTGGCG
ACTCAGTTGG AGCGGCGGGT GGCTTTTCGT CGGGCCATGA AAAAAAGCGT AAGCATGGCT
CTTAAATTCG GCGCTCAAGG GATCAAGATC ACCTGTAGCG GACGTCTGGG TGGTGCCGAA
ATGAGCCGGA CTGAGTGGTA TCGTGAAGGG CGAGTGCCTC TTCACACCCT CAGAGCTGAT
ATTGATTATG GATTCGCCGA AGCCAAGACC ACTTACGGGA TCATCGGCGT CAAGGTTCTC
ATCTTCAAGG GCGAAGTCCT GTCGCAGGAT TAA
|
|---|
| Protein sequence | MGQKVHPIGF RLGVVKTWSS RWYAEGEYSQ LLHEDIKLRN YLKKRLYHAG VAKIELERAA
SKAKINVYAA RPGIIIGKKG AEVEALKKDL ARLTDKEVFI NIQEVRKPEI DAQLVAENVA
TQLERRVAFR RAMKKSVSMA LKFGAQGIKI TCSGRLGGAE MSRTEWYREG RVPLHTLRAD
IDYGFAEAKT TYGIIGVKVL IFKGEVLSQD
|
|---|
| |