| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0700 |
|---|
| Symbol | rpsJ |
|---|
| ID | 3723385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 852898 |
|---|
| End bp | 853206 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637750291 |
|---|
| Product | 30S ribosomal protein S10 |
|---|
| Protein accession | YP_356129 |
|---|
| Protein GI | 77918314 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0000000000505972 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAGCC AGAAAATCAG GATCCGTTTA AAGGCTTACG ATCATAAACT GCTCGACCTT
TCGGTTAACG AAATCGTCGA TACCGCAAAG CGTACCGGTG CTCGTGTTGC AGGACCTATT
CCTCTGCCCA CGATTATCAA CAAGTATTGT GTCCTTCGTG GCCCCCATGT TGATAAAAAG
AGCCGCGAGC AGTTCGAGAT GCGTACTCAT AAGCGCCTTC TCGATATTGT CGAGCCCACG
CAGCAGACTG TTGATGCTTT GATGAAGCTC GATTTGTCTG CGGGCGTTGA CGTTGAAATC
AAGTTGTAA
|
|---|
| Protein sequence | MQSQKIRIRL KAYDHKLLDL SVNEIVDTAK RTGARVAGPI PLPTIINKYC VLRGPHVDKK
SREQFEMRTH KRLLDIVEPT QQTVDALMKL DLSAGVDVEI KL
|
|---|
| |