| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0684 |
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| Symbol | pyrF |
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| ID | 3723990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 833054 |
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| End bp | 833788 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637750270 |
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| Product | orotidine-5'-phosphate decarboxylase |
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| Protein accession | YP_356113 |
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| Protein GI | 77918298 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0000000595201 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTGTCG AAGCGCGTAA AAAATTGATC TTTGCCCTTG ATGTCGAGTC GGGGGCATCG
GCGGAAGAAT GGGTGCGGCG CCTGCGTGGC AAAGTCGGAG TATTTAAAGT CGGCAAACAG
CTCTTTACCC GATGCGGGCC CGATGTGGTT CGCATGATCC GGGACCATGG CGGCGAGGTT
TTTCTCGATC TGAAATTCCA TGATATTCCC AATACCGTTG CCAAGGCCGC CATTGAGGCG
TGTCGTCTCG GGGTGCGCAT GTTCAATGTG CATGCCTTGG GTGGGCGTGC GATGATGGCG
GGGGCAGCCG AGGCGGTGAG AGAATACTTT GCCGCCGGTG AGGATGTGCC GCCGTTGCTC
CTGGGGGTTA CGATCTTGAC TTCTTCCAGC GAAGAAACGT TGCGGGAGGT CGGTGTCGAC
AGGCCTGTCG AAGAAATGGT ACCTCGCCTG GCATGTCTGG CGAAGGGGGC AGGGCTCGAT
GGCGTCGTAG CCTCGCCGCG GGAAGTCGGC TTGATACGCC GGGCCTGCGG GCGCGATTTT
GCTATCGTGA CACCGGGGGT GCGGCCCTCT TTCGCGGAAA CAAACGATCA GCAGCGCATT
ATGACCCCGG GTGAGGCGAT TGCTGCCGGA TCCGATTTCC TGGTGGTCGG TCGGCCCATC
GCTGCATCCG AAGATCCGGT GGGCGCTGCT CAGCGTATCG TGGAAGAGAT GGCAGCCGCG
TTGGAAGAGG GCTGA
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| Protein sequence | MLVEARKKLI FALDVESGAS AEEWVRRLRG KVGVFKVGKQ LFTRCGPDVV RMIRDHGGEV
FLDLKFHDIP NTVAKAAIEA CRLGVRMFNV HALGGRAMMA GAAEAVREYF AAGEDVPPLL
LGVTILTSSS EETLREVGVD RPVEEMVPRL ACLAKGAGLD GVVASPREVG LIRRACGRDF
AIVTPGVRPS FAETNDQQRI MTPGEAIAAG SDFLVVGRPI AASEDPVGAA QRIVEEMAAA
LEEG
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