Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0663 |
Symbol | |
ID | 3724003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 800413 |
End bp | 802566 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637750249 |
Product | putative sensory box/response regulator |
Protein accession | YP_356092 |
Protein GI | 77918277 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAGCC CATGCTCAAG CGGCAATCCC CCCATAAAAA CCCGCAGCGA CCTGTTCTGC ATTATGCTGC GCGATGGTCA CATTGTCGGC AGCAGCTTCG CCTGGCAGGC GCTGCTGGGC TACCCGCCGG AAAGTTTCCG TGCTCTTAAG CTGCAAAATC TGCTGACACC GGGCCAGGAC CATTGCTGGT CGCGCATCCT TGCCAAATTA CAAACACACA ACGCGACATC GCTCCTGCTG CGCTGTGAGG CCGCCAACGG ACGCATTCTC TACCTGCTGG GGCATTTCAC TCCGGCGACC CCCGCATTAC AGGGTGCCAT CCGCGCCACG TTTCAGGATA TCAGCATCTC CTACCAGGCC AAACTCCTTA CGCGTCAGAG TTTTCGCATG GTGCGGCAGA TGGCGACACA GACCAACGGC GCAATGGTCA TGTTTTGCGA CTCCGGCCGG GTCTGTCATT GGAGTCCCGA GGCCGAAGCC CTGTTCGGCT ATCGAAGCAA GGACATCCTG CGCCGGGACA TACGGTCGGC CATCCCCCTC TGCCACGACC TGGCTGCTCC GCAGACTACC GAGATATCCG GACACCCGCC GCCCTGTCCC GACCTCGCCC TTGATCCTCG GGAGGTCACC TGCCGTTGCA AGGACGGCAC GCAGGTCACT GTCGACCTCA GCCTCGCCTC CTTCGCCACA CACAAACGCC GCTACACCAT CGGCCTATGT TACGATCGCC AGCGACATAC CGCGCAGGAT CGCCACATCC AGCAGCTGGC CTATTACGAT CCTCTAACCG AACTGCCCAA CCGGGTTTTG CTGCAGGAGC GGCTGGATCA ATCCCTTGCC GAAGCGCTGC GCTCTCATCA CCCCCTGGCG GTATTATTCG TTGATTTGGA CCGTTTCAAG CAGGTCAACG ACTCTTTGGG ACATGCCATC GGCGACCAAC TGCTCAAAAT GGTCGGCCAG CGTCTGCAAC AGTGTCTGCG CAGCAACGAC ACCGTTGCCC GCCTTGGCGG CGACGAATTC ATCATCGTGC TGTCCGGATT CCGTCACCCG TCCAGTCTGC CGAAAATTCT GGATAAAATT TTCGATGCGT TGTCGAAGCC TTATCGCATC GAAATGCACC GCATCGTTGT TACAGCCAGT ATCGGGGTTG CGGTTTGTCC GGACGACGGC ACCGCTGCCG ATCTGCTGAT GCGCAATGCG GACATCGCCA TGTATGTCGC AAAGGAAGAA CGAGGCAACA GCTACCAGCT CTTTTGCCAG GAGATGAATC AGGCGCTGAA GGATCAGTTG GCGCTGGAAA CCAACCTGCG ACAGGCCGTG GACAACGGGG AATTCTTCCT GCTGTTTCAA CCGCGCTTTC ACCTCGCTTC CGAGAAAGTC GTCAGCATCG AGTGCTTTCT GCGTTGGAAG CGGTCCGACG GCAACATCCT GTCTCCCAAG GCTTTTTTAC CCCGACTTGA AGAAATGGGG CTGATGGCGT CCCTCGGCAA CCGCATTCTG CGCAAGGCTT GCGCCTTCGG CGCCAGCTTG CAACAAGCCG GCATGCCCCA TATCCCGGTG GCGATCAATC TGTCCTGCAG TCAATTCAGG CAAAGGAACC TGCATGAAAG CATCGCTACC ATTCTGCAGG AAACGGGACT GCCGGCAAAC TGCCTGGAAC TTGAAATCAA CGAATGCACA CTGCAGAAAA ACGAAGAGCG GGCCGAAGAA ATACTGCGCA GCATCAAGCG ACTCGGGGTA AGCTGGTCGC TGGATAATTT CGGTCTGGGG TATACCTCCC TGCAAAGGCT GAAAACCCTG CCCTTCGACA ATCTTAAAAT CGACCGGCAT TTCATCAGAA ATCTCCCCGA AACCCAAACC GACGCCGCTA TGGTCGGAGC GATCCTCGCC ATGGCCCGCA ATCTGGGGCT GGTGACCATC GCCGAGGGGA TTGAGACCTT TGCCCAGCAT CACCTCCTGC TGGCCATGGG CTGTCACTAC GGCCAGGGAT TTTTATTCCG GGAACCCTGC CGGCCCGGGG AACTTCAAAC CTTCCTCCAA GCAGAAATCA GCCCACTCCA GCCTGCCTTC CCCACCATTG CGCCCCCCTT CACCGACTCC GATTGCAAAG CGCCCGAAAA CACCCGTGCG ACATCCGCCG GTCCCGTCCA TTAA
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Protein sequence | MRSPCSSGNP PIKTRSDLFC IMLRDGHIVG SSFAWQALLG YPPESFRALK LQNLLTPGQD HCWSRILAKL QTHNATSLLL RCEAANGRIL YLLGHFTPAT PALQGAIRAT FQDISISYQA KLLTRQSFRM VRQMATQTNG AMVMFCDSGR VCHWSPEAEA LFGYRSKDIL RRDIRSAIPL CHDLAAPQTT EISGHPPPCP DLALDPREVT CRCKDGTQVT VDLSLASFAT HKRRYTIGLC YDRQRHTAQD RHIQQLAYYD PLTELPNRVL LQERLDQSLA EALRSHHPLA VLFVDLDRFK QVNDSLGHAI GDQLLKMVGQ RLQQCLRSND TVARLGGDEF IIVLSGFRHP SSLPKILDKI FDALSKPYRI EMHRIVVTAS IGVAVCPDDG TAADLLMRNA DIAMYVAKEE RGNSYQLFCQ EMNQALKDQL ALETNLRQAV DNGEFFLLFQ PRFHLASEKV VSIECFLRWK RSDGNILSPK AFLPRLEEMG LMASLGNRIL RKACAFGASL QQAGMPHIPV AINLSCSQFR QRNLHESIAT ILQETGLPAN CLELEINECT LQKNEERAEE ILRSIKRLGV SWSLDNFGLG YTSLQRLKTL PFDNLKIDRH FIRNLPETQT DAAMVGAILA MARNLGLVTI AEGIETFAQH HLLLAMGCHY GQGFLFREPC RPGELQTFLQ AEISPLQPAF PTIAPPFTDS DCKAPENTRA TSAGPVH
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