Gene Pcar_0663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0663 
Symbol 
ID3724003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp800413 
End bp802566 
Gene Length2154 bp 
Protein Length717 aa 
Translation table11 
GC content58% 
IMG OID637750249 
Productputative sensory box/response regulator 
Protein accessionYP_356092 
Protein GI77918277 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGCC CATGCTCAAG CGGCAATCCC CCCATAAAAA CCCGCAGCGA CCTGTTCTGC 
ATTATGCTGC GCGATGGTCA CATTGTCGGC AGCAGCTTCG CCTGGCAGGC GCTGCTGGGC
TACCCGCCGG AAAGTTTCCG TGCTCTTAAG CTGCAAAATC TGCTGACACC GGGCCAGGAC
CATTGCTGGT CGCGCATCCT TGCCAAATTA CAAACACACA ACGCGACATC GCTCCTGCTG
CGCTGTGAGG CCGCCAACGG ACGCATTCTC TACCTGCTGG GGCATTTCAC TCCGGCGACC
CCCGCATTAC AGGGTGCCAT CCGCGCCACG TTTCAGGATA TCAGCATCTC CTACCAGGCC
AAACTCCTTA CGCGTCAGAG TTTTCGCATG GTGCGGCAGA TGGCGACACA GACCAACGGC
GCAATGGTCA TGTTTTGCGA CTCCGGCCGG GTCTGTCATT GGAGTCCCGA GGCCGAAGCC
CTGTTCGGCT ATCGAAGCAA GGACATCCTG CGCCGGGACA TACGGTCGGC CATCCCCCTC
TGCCACGACC TGGCTGCTCC GCAGACTACC GAGATATCCG GACACCCGCC GCCCTGTCCC
GACCTCGCCC TTGATCCTCG GGAGGTCACC TGCCGTTGCA AGGACGGCAC GCAGGTCACT
GTCGACCTCA GCCTCGCCTC CTTCGCCACA CACAAACGCC GCTACACCAT CGGCCTATGT
TACGATCGCC AGCGACATAC CGCGCAGGAT CGCCACATCC AGCAGCTGGC CTATTACGAT
CCTCTAACCG AACTGCCCAA CCGGGTTTTG CTGCAGGAGC GGCTGGATCA ATCCCTTGCC
GAAGCGCTGC GCTCTCATCA CCCCCTGGCG GTATTATTCG TTGATTTGGA CCGTTTCAAG
CAGGTCAACG ACTCTTTGGG ACATGCCATC GGCGACCAAC TGCTCAAAAT GGTCGGCCAG
CGTCTGCAAC AGTGTCTGCG CAGCAACGAC ACCGTTGCCC GCCTTGGCGG CGACGAATTC
ATCATCGTGC TGTCCGGATT CCGTCACCCG TCCAGTCTGC CGAAAATTCT GGATAAAATT
TTCGATGCGT TGTCGAAGCC TTATCGCATC GAAATGCACC GCATCGTTGT TACAGCCAGT
ATCGGGGTTG CGGTTTGTCC GGACGACGGC ACCGCTGCCG ATCTGCTGAT GCGCAATGCG
GACATCGCCA TGTATGTCGC AAAGGAAGAA CGAGGCAACA GCTACCAGCT CTTTTGCCAG
GAGATGAATC AGGCGCTGAA GGATCAGTTG GCGCTGGAAA CCAACCTGCG ACAGGCCGTG
GACAACGGGG AATTCTTCCT GCTGTTTCAA CCGCGCTTTC ACCTCGCTTC CGAGAAAGTC
GTCAGCATCG AGTGCTTTCT GCGTTGGAAG CGGTCCGACG GCAACATCCT GTCTCCCAAG
GCTTTTTTAC CCCGACTTGA AGAAATGGGG CTGATGGCGT CCCTCGGCAA CCGCATTCTG
CGCAAGGCTT GCGCCTTCGG CGCCAGCTTG CAACAAGCCG GCATGCCCCA TATCCCGGTG
GCGATCAATC TGTCCTGCAG TCAATTCAGG CAAAGGAACC TGCATGAAAG CATCGCTACC
ATTCTGCAGG AAACGGGACT GCCGGCAAAC TGCCTGGAAC TTGAAATCAA CGAATGCACA
CTGCAGAAAA ACGAAGAGCG GGCCGAAGAA ATACTGCGCA GCATCAAGCG ACTCGGGGTA
AGCTGGTCGC TGGATAATTT CGGTCTGGGG TATACCTCCC TGCAAAGGCT GAAAACCCTG
CCCTTCGACA ATCTTAAAAT CGACCGGCAT TTCATCAGAA ATCTCCCCGA AACCCAAACC
GACGCCGCTA TGGTCGGAGC GATCCTCGCC ATGGCCCGCA ATCTGGGGCT GGTGACCATC
GCCGAGGGGA TTGAGACCTT TGCCCAGCAT CACCTCCTGC TGGCCATGGG CTGTCACTAC
GGCCAGGGAT TTTTATTCCG GGAACCCTGC CGGCCCGGGG AACTTCAAAC CTTCCTCCAA
GCAGAAATCA GCCCACTCCA GCCTGCCTTC CCCACCATTG CGCCCCCCTT CACCGACTCC
GATTGCAAAG CGCCCGAAAA CACCCGTGCG ACATCCGCCG GTCCCGTCCA TTAA
 
Protein sequence
MRSPCSSGNP PIKTRSDLFC IMLRDGHIVG SSFAWQALLG YPPESFRALK LQNLLTPGQD 
HCWSRILAKL QTHNATSLLL RCEAANGRIL YLLGHFTPAT PALQGAIRAT FQDISISYQA
KLLTRQSFRM VRQMATQTNG AMVMFCDSGR VCHWSPEAEA LFGYRSKDIL RRDIRSAIPL
CHDLAAPQTT EISGHPPPCP DLALDPREVT CRCKDGTQVT VDLSLASFAT HKRRYTIGLC
YDRQRHTAQD RHIQQLAYYD PLTELPNRVL LQERLDQSLA EALRSHHPLA VLFVDLDRFK
QVNDSLGHAI GDQLLKMVGQ RLQQCLRSND TVARLGGDEF IIVLSGFRHP SSLPKILDKI
FDALSKPYRI EMHRIVVTAS IGVAVCPDDG TAADLLMRNA DIAMYVAKEE RGNSYQLFCQ
EMNQALKDQL ALETNLRQAV DNGEFFLLFQ PRFHLASEKV VSIECFLRWK RSDGNILSPK
AFLPRLEEMG LMASLGNRIL RKACAFGASL QQAGMPHIPV AINLSCSQFR QRNLHESIAT
ILQETGLPAN CLELEINECT LQKNEERAEE ILRSIKRLGV SWSLDNFGLG YTSLQRLKTL
PFDNLKIDRH FIRNLPETQT DAAMVGAILA MARNLGLVTI AEGIETFAQH HLLLAMGCHY
GQGFLFREPC RPGELQTFLQ AEISPLQPAF PTIAPPFTDS DCKAPENTRA TSAGPVH