Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0634 |
Symbol | |
ID | 3724049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 764391 |
End bp | 765803 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637750219 |
Product | response regulator |
Protein accession | YP_356063 |
Protein GI | 77918248 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.00145352 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA TCCTCATCAT TGATCAACAG GATTTTTCCC GGATTGAATT AAAGAACTTC CTGGATTCTG AATATCTTGT CATAGAATCA AAAAATGAAA AAGAAGCGCT TGAACAAATC GACCACCATC ATCCGGACCT GGTTATCCTG GATATGGATA TCATAGGCGA AAACAGTCCC AATTTATGTT TAAAACTCAA AAGATCCAAA GGATTAAAAA ACGTCCCATT GATACTGTTA TTTTCGAGTG AACATAAGGA GGCTATTGTT AATGGTCTGC ATTCCGGCGC AGACGACTAC CTGACCAAGC CATTCAATCG AAATGATCTT TTATCAAGAA TCGAAATCCA TCTCCGCACT CAAAATTATT ATTCGGATCT CCGGAAAAAC GATTTACTCA TGTTGCTGGA GTTAACGGAG ACCATTTCCG TTACCAGAAA CCCCAGAAGG ATTCTCTCCA TCATCGTTGA AAGACTGATC AAAACAATCG ACGTCTCACG ATGTTCTATT ATCGGGATCA ATGACTTCGG TGAATTGCTG GTATTGGCCA GCAGCGATCT GCCGGAAAAT CAGGAAATCA AGCTCGATTT GAAGAAATAT CCGGAAATCG AAAAAGCGCT GGAAACCCAG CGCCCCGTCG TTTTGCAAGA TATCACCAAT AGCGCCCTTA TGAAACCGGT CAAAAAACAC ATCGAGGCTT TGTCGGACAA TGCGGTTTTC GTCGTGCCGA TTATCAAGAA GCAAAACGTG ATCGGGACCT TTTTCCTGCG AACCGCATGC CTGCAAAAAG GGGGCATCAC CGACAGAATT TTCAAGTTGT GTCAGGTCAT CGCCAGCATA TCGGGAAACG CCCTTGAGAA TGCGATTATT TTTGAGTCCA TGGAGACGAA CAAGAAGCTG CTCGAGGATT TATCCGTACG GGACAGTCTG ACGAAACTGT ATAATCATCA GCATTATCAT TCACGGCTGG AGGACGAGTT TTCCAGGGCG CAGCGCTACA ATCTGGATTT GTCCTGTATC TTTTTGGATA TCGACAATTT CAAAAATATC AATGACCGCT ATGGGCACCT CGCCGGCGAC ATGGTGCTAC GGCAAATTGC CCGACTCATC AGCCAGGTTA TCCGTAAAAG TGACATCTCC GCACGTTATG GCGGTGAAGA GTTCGCCATA TGCCTCCCCA ACACCGGCGG TGTTGCCGCA AACGAACTGG CGGAAAGACT CCTGGTGATG ATCCGGGAGC TTTCCATTCA ACAACTCAAA GGGGAACATG TCACGGTCAG CATAGGTACC TCGACCTATA GCAACCATAA CGTGGCGTCC TATAGCGAAT TGCTCCACCT CGCCGACGAC GCCATGTACG AGGCCAAGAA ATCAGGAAAA AATCGGTTCT GTTGTTCCAC CGCTATGTTT TAA
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Protein sequence | MKKILIIDQQ DFSRIELKNF LDSEYLVIES KNEKEALEQI DHHHPDLVIL DMDIIGENSP NLCLKLKRSK GLKNVPLILL FSSEHKEAIV NGLHSGADDY LTKPFNRNDL LSRIEIHLRT QNYYSDLRKN DLLMLLELTE TISVTRNPRR ILSIIVERLI KTIDVSRCSI IGINDFGELL VLASSDLPEN QEIKLDLKKY PEIEKALETQ RPVVLQDITN SALMKPVKKH IEALSDNAVF VVPIIKKQNV IGTFFLRTAC LQKGGITDRI FKLCQVIASI SGNALENAII FESMETNKKL LEDLSVRDSL TKLYNHQHYH SRLEDEFSRA QRYNLDLSCI FLDIDNFKNI NDRYGHLAGD MVLRQIARLI SQVIRKSDIS ARYGGEEFAI CLPNTGGVAA NELAERLLVM IRELSIQQLK GEHVTVSIGT STYSNHNVAS YSELLHLADD AMYEAKKSGK NRFCCSTAMF
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