Gene Pcar_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0556 
Symbol 
ID3723461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp678986 
End bp679777 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content57% 
IMG OID637750142 
Producthypothetical protein 
Protein accessionYP_355986 
Protein GI77918171 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGC AGCGTGTGAT GGAAGATGTC GGCATGTCCA ATCTGCAATT TCCCATCAGG 
GTATTGTCCG GGCGGGATCT CCAGGGACAG GCGACCGTGG CCCATATAAC CGTCAATGCC
CGGATCGTCC AGGCCTTCGA GGCGCGCTGG ATCGATCGGT TCATTCAGGT TCTGCACCGG
CACCAGGGGG TCGTCGGTGC CGGCGCCCTG CAGGACCAGG CCCTTGACTA TCTGCATGAA
CTCGATGCCC GCTCGGTATG TGTGGCGTAT GACTTTCCTT ACTTTATCGA AAAAACGACT
CCCGTTTCGC AGGAGAAGTG CCTAGTGCGC TACCGTTGTG CTTATGAACT GCGGGTGCAT
GCTCTGAGTC GCGAACCGAC GGTTATTTTT CGCATCGAAG TGCCGGTTGT CACCACCTAC
CCCGGATCGA GCAGGGAAAA GCCCGGTGGG CTGTTCGGGC AGCTCAGTCG CATCAGTCTG
GAAGTTATGG CACGGCGGGA CATCTATCCC GAGGATCTCG TGGAGATGGT CGATCGCCAC
GGGCTGGCAC CTTTGTATTC CTACCTGACC GAAGACGATC AGCAGCATAT CATCGAGCGC
ATTCATGCCG AGGATAGAAA CAGTGTGGTG GTGGTCGATG CCATCAAACA GGAACTGGCG
CGCCGCCGGG ATATCGAATG GTATGCCGTC AGGTCGGCTA ATTACGGCAT GCTGCACTCC
TACTCGACCA TGGTCGGCTT GGAAAAAAGT CCCTGGATTC CTTTCAGCGG CTATGAATCG
GGGGATATCT GA
 
Protein sequence
MTQQRVMEDV GMSNLQFPIR VLSGRDLQGQ ATVAHITVNA RIVQAFEARW IDRFIQVLHR 
HQGVVGAGAL QDQALDYLHE LDARSVCVAY DFPYFIEKTT PVSQEKCLVR YRCAYELRVH
ALSREPTVIF RIEVPVVTTY PGSSREKPGG LFGQLSRISL EVMARRDIYP EDLVEMVDRH
GLAPLYSYLT EDDQQHIIER IHAEDRNSVV VVDAIKQELA RRRDIEWYAV RSANYGMLHS
YSTMVGLEKS PWIPFSGYES GDI