Gene Pcar_0549 details

Gene Information

• Locus tag: Pcar_0549
• ID: 3723454
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 670809
• End bp: 672734
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637750135
• Product: hypothetical protein
• Protein accession: YP_355979
• Protein GI: 116878428

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000000000210535
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCAGT CCGACCCCAC ATACCAGCTC ATCGCCCGCA GCGTCGCCGC CGACCACCAG 
GGGCTTGCGG AACTCCGCCC GCTGCTGGCG CGCAAGTTTG ATCTCGATGG TTATATCCTG 
CGGCAACGCC TTATCGGACG CGGATGCAAC TGCATTGCCG AAGGCAAACG GGAGCGATTG 
ACGAACATCG CAGACTTGTT GGCGGAGCAG AATATCCGTA GCTGGATTAT CGAAGCCAAA 
ACACCGCGCT TTGCACCGCA GAGATTGCGG AGCGTACGCC TGGGCGACGA ACAACTTGCC 
CTGGTAACCG GCGAAGGGAC GGTAAACCTC ACCGCCGAGC ATCGGGTGCT GGCGGTGCTC 
GCCGACCTTT CCGGTCAGGC TGCCGCCAAA AACCTTAAAT TTCACATGGC CCAACGCGTC 
TATAACGGTG TGCGCGAAAC CCGCCCGTTA GGCGATGCGG AACTGGCCAA GGCGACTTTG 
CGCGGCAAAC CGGTACTCGA TGTGTACCGT TTCAATGACC AGGGCGAAGT CGACGCTGCG 
GTCCGCATCC TACCGGGGCG GTTCGACCCG CGTGGACTGG GCGACCTTGC CACCCTCAGC 
TCTGTCGGCA ACCTGAAGGT CCTTTTGCAG CAGATTCGCC GGCAGGTCGC TTCTTGCCGA 
CTGCAACTCG ATTTTGGTCT TGCCAACCTG CCCGGGTGTC GCCTCAAAAC CGACGAAGAC 
GGCCCGAACT GGCAACGCGA CAACCTGGCC GCCCTGACCC GTTTTGGCTG GCTGATGACC 
GAACTGGACG AATCCGGTTC TGTCTCCCCA GCCTCTGCAA TGTCCGCCGG TACGGTAGCC 
CATCCTTTGC TGGAGATGCT GCGAAAAGAG CTTGGGGAGG AAGCACCTGC TGCTACCGCC 
CCCTCGCAAC CCGCCCCCAG CGTCAGCCTG CCGCCGCCTC CGCCACAAAC GGGAGCGCAA 
CGCACGGCCA GCCCGCAACT GACCCTGGGC ATTGCCGTGG CGGTGGGCTT CGGCCTGTTG 
ACCGCTACCG GCACTAACGC GGTGGTTTCC ACCTTACGCG CCGGCATAAG AACCGCTATT 
CTGCCGGCAC TGCTGACCGG CCTCTGCTTC TGGGGCGCCC TCCACTTCTG GCGTCTGAAG 
CGACATGTGG AAAACACCCC GACAAGCAAG GCCCGTTCTC TGTCCATGGG ACTGGTGGAA 
TTGCAAGGCC GGGCCACCAG AAAATTCGCA CTGGTATCGC CGTTAAGTCA GTTGCCCTGC 
ATTTTTTACC GGCTCCGCAA ATACCGACGC GACAGCAAGA ACAACTGGCG GCTTACGAGT 
ACCACGGACA GTGGCCACGT GCCTTTTTAT CTGGAGGACG ACACCGGCAG AGTCACCATC 
GATCCGTGCG GCGCATCCGT CACCGCCCGT CACCGCCAGG AATCCTACGG CGGCCGTTCC 
AACACCATGT TCGGCAGCGT TGGCGGCAGC AGCAGTGAAA AATGGATCGA AGAGATGGTC 
ACCGAAGGTA CGCAGCTGTA TATTCTCGGC CAGGCCCGTG AAAACAAACG CAGGGACGCC 
TCTCTGCGAG CGCGGGTCAC CCGTGCGCTG CAGGAACTCA AACGCAATCC GGACGCGTTG 
CAGCAGTACG ACCGCGATGG CGACGGCCGC ATTTGCGAAA CGGAATGGGA ACATGCACGC 
AACAACATCG AACAGCAGGT ACTGCAGGAC AGCCTCGCCG GCGATCACAC CCGGGTAACA 
CAAAGCGATC GGGTGATTGT CGGCCGGCCC CGTCAAAGAT CGATTCCTTT CGTCATCGCC 
GAGGCCGAAT CGGAACGACA CCTGGTTCGC AATTATATCT TGCTGACCCT GCCTTTGTTT 
GCCGGATCGC TTGGCGGTCT GGTCTGGACC TTAATGACGC TGATAAATTT TTTGCAGCCG 
CAGTGA 

 

Protein sequence

MSQSDPTYQL IARSVAADHQ GLAELRPLLA RKFDLDGYIL RQRLIGRGCN CIAEGKRERL 
TNIADLLAEQ NIRSWIIEAK TPRFAPQRLR SVRLGDEQLA LVTGEGTVNL TAEHRVLAVL 
ADLSGQAAAK NLKFHMAQRV YNGVRETRPL GDAELAKATL RGKPVLDVYR FNDQGEVDAA 
VRILPGRFDP RGLGDLATLS SVGNLKVLLQ QIRRQVASCR LQLDFGLANL PGCRLKTDED 
GPNWQRDNLA ALTRFGWLMT ELDESGSVSP ASAMSAGTVA HPLLEMLRKE LGEEAPAATA 
PSQPAPSVSL PPPPPQTGAQ RTASPQLTLG IAVAVGFGLL TATGTNAVVS TLRAGIRTAI 
LPALLTGLCF WGALHFWRLK RHVENTPTSK ARSLSMGLVE LQGRATRKFA LVSPLSQLPC 
IFYRLRKYRR DSKNNWRLTS TTDSGHVPFY LEDDTGRVTI DPCGASVTAR HRQESYGGRS 
NTMFGSVGGS SSEKWIEEMV TEGTQLYILG QARENKRRDA SLRARVTRAL QELKRNPDAL 
QQYDRDGDGR ICETEWEHAR NNIEQQVLQD SLAGDHTRVT QSDRVIVGRP RQRSIPFVIA 
EAESERHLVR NYILLTLPLF AGSLGGLVWT LMTLINFLQP Q