| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0546 |
|---|
| Symbol | cheW |
|---|
| ID | 3723451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 667760 |
|---|
| End bp | 668275 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637750132 |
|---|
| Product | chemotaxis signal transduction protein, CheW-like |
|---|
| Protein accession | YP_355976 |
|---|
| Protein GI | 77918161 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 4.32366e-16 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAGCCA TGCCTAACAG CCAAAGCACA GCCAAACAGA TGTCGCAAGC TTCGATCAAC
AGTGGCCTTG AAACCGCCGT CGAGTCAGAA GATACCATGA AGGATAAATT CCTCACTTTC
TGGATTGCCG ATGAGGAATA CGGTATGGGT ATCGAGCATG TCATCGAAAT CATAGGCGTG
CAGAAGATTA CCAAAGTACC CGACATGCCA CACTTCATCA AAGGCGTGAT CAATCTGCGC
GGTCGGGTTA TTCCGGTCGT CGACGTACGC ATCCGCTTCG GACTATCCGA ACGTGAATAC
GACGAACGTA CCTGCATCGT CGTCATTCAA GTCAACGATC AGACCACCGG CATGATTGTC
GACCGTGTCA ACGAAGTATC CAACATTCCG CAGGACAAGA TCGAAAAATC CCATTCCGGG
GATATGGCCG CCACCGACAG TTATATTCTG GGTATCGGCA AAACCGGCGA TTCGGTGAAA
ATCCTCCTGG ATATGGACAA ATTCATGCGC CATTAA
|
|---|
| Protein sequence | MEAMPNSQST AKQMSQASIN SGLETAVESE DTMKDKFLTF WIADEEYGMG IEHVIEIIGV
QKITKVPDMP HFIKGVINLR GRVIPVVDVR IRFGLSEREY DERTCIVVIQ VNDQTTGMIV
DRVNEVSNIP QDKIEKSHSG DMAATDSYIL GIGKTGDSVK ILLDMDKFMR H
|
|---|
| |