| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0544 |
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| Symbol | |
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| ID | 3725873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 659346 |
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| End bp | 665123 |
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| Gene Length | 5778 bp |
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| Protein Length | 1925 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637750130 |
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| Product | large extracellular alpha-helical protein |
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| Protein accession | YP_355974 |
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| Protein GI | 77918159 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGAC TGCTCCGCGC CGTCAGATTG GGGATAAATA AACTTGCCGG ATCGTTTTCC
TGGACGCCGC CGCCCTGGGC CGCAGCGTTG CAACGCACAC GCAAGCAAAG CCCTAAACGA
TTCTGGAGCG GCCTGGGATT GCTGGCGTTG CTGGCTTTCG CCGTCGTGGC TGGCTACGGC
TACTATCGGC ACCTGCCCAG GCCTCTGCTG TTGACGGCCG ACATCGAGGC TCCGGGCATC
ACCCCCAACG ACGAAACCCT GCAGCCTGAT GCCCTGCGCG TCAGCTTTCG TTACAATACC
CAGCGGCTGC AGCCGGAACA ACAGATACCC GAGATCATGC CATCGGTGGC GCGCCTCGAC
CTGGTGGATC AACGCATCGA AACCGGCATC CGCCTGAAGC CTGCCATAAG TGGTACGTGG
AGTTGGGAGG GGGACCGCAC CCTGATATTT GTCCCCGACC GGGAATGGCA GGCCGGTACC
CGCTACCGTT TGCGCTTCGA CAAACAGCTG TTTTCCCCGG AATCCCGTTT CAGCAGCCTG
GACTATACCT TTGACACTCC GGCTTTTGAT GTCGACCTCG ACAATCTGGA GTTTTACCAG
GATCCGCGAA ATCGTAAAAT CCGCCAGGCC GTTGCGACCC TGCGTTTTTC CCATCCGGTC
GATGCCCAAA GCCTGGAAAA ACACCTGGCC CTGAGCATGC ATCCCTCCGA CAAGGACAGC
AAGGCCAGCC CTCAAAAAGT CGGGTTCACT CTCAGCTACG ACAAGAACCA GCGCGAAGCC
TATGTCCACA GTATGCCGCT GCAACTGCCG GAGCATAGCA ACTACCTGCG GCTGTCTCTA
CAGGCCGGTA TCGCCCCGGC CATCGGCGGG GAGCCATCCA CGCGGCAACT CGCCAAGGAG
TTACTGATAC CCGACCGACT GAGTTTTCTG AAAGTGGAAG AGGCCGAGGC AATTATCGTC
CGTACCTCGA CCAATGAACC GCAGCAGGTT CTCAGACTCC GCTTCACCGA CGATATCACC
GAGGCCGAGC TTAAGGACAA GCTGCAGGCC TGGCTGCTGC CGCCGCGCAA CCCGCAGCGA
AACAGTTCCC GCTGGCGCAG CCCCCGGGAG GTCACTTCCG CGATTCTGGC CCAGGCCACC
CCTGTGCCCC TGGTGCCCCT CGAGACGGAG CACGGCTTTT CCAGGGAATT TCACCTGCCC
CTGGATGCAC CGCCGGGAGG TACTCTTTAT CTTCGCCTCA AACCGGGGCT GACCTCTTTG
GGCGGCTTCG TGCATGCCTC GTTCTACGAC ACCCTGTTGA GGGCGCCGAC ATACCCGAAG
GAGCTCCAGA TCGCCGCCGA CGGAGCGCTG CTCTCCCTGG CCGGATCCCA CCGATTGGGG
CTCATGACCC GCGGCCTGGA CGCCTTCCAG GTCCGCATCG GCAAACTGCT GCCGGGCCAG
TTGCAGCATC TGATCAGTCA GACGTACGGC GATTTAAGCG ACCCGGACTT TGCCAGCTAC
CGGTTTGACG AAGACAATAT CGTCGAATAT GCGCAGCAGA TCATCGATCT GAAACAGCTC
CCGCCCCAAC AGGCCAACTA CGCCTCCGTC GACCTCAGCG CCTACCTGCC ATCCGACAGG
GATCGCTGCG GACTGTTCTT TGTGGAACTC TGCGGCTGGG ACAAAACCCG TAAGCGCAAA
ATGAGCTGGG TCAGCGACAA ACGCCTGATC CTGGTGACCG ACTTCGGCCT GCTGGTCAAG
GACAATGCCG ACCGGAGTCA CGACGTCTTC GTCCGATCTT TCGGCAACGG GCAACCGGTG
GCCGGCGCCA GGGTCACTCT GCAGGGGCGC AACGGCCTGC CGCTACTGAC CCGCACCACC
GACGCCGAGG GACATGTAAA GTTTCCGAGC ACCAAGGGGT TCAGGAACGA GCAGCAGCCG
ACCGCCTATG TGGTCACAAC TGCCGACGAC ATGGCCTTTA TCCCCTTTGA ACGCCGGACC
CGGCAACTGA ATTTCTCCCG TTTCGAAGTC GGCGGCGTTC GCGACCGGCA ACGCAACGGG
CAGAGCCTGG GGGCTTTCCT GTTCAGTGAC CGCGGCCTGT ACCGTCCGGG AGAGCAGGTC
GCCATCGGCT GTATCGTCAA AGCGCAGCCG CTGAACAATA TTGAAGGGAT CCCCCTGGAA
ATCGCCATCC GCAACCCACG CGGCACCGAG GTTGCCAGCA AGCGCCTCAA GCTGCCGGCC
AAGGGCTTCT TCGACTATCC CTATGCCACG CAAGCTGCCT CGGAAACCGG CACCTATCAA
GTGGCCCTCT ATCTGGTGCG CGACAACAAC CACCGGGGCC GCATGATCGG CCTGGACCAA
TTCCGCGTCG AGGAATTCCA ACCCGACACC CTGAAAATCC GGAGTACGCT GCTCGGCATC
GAGGAGCGTG GATGGAGTAC CGCAACCCGG CTCACGGCCC GCGTGGGCCT GCGCAACCTG
TTCGGCACGC CGGCCCAGGG GCGCAAAGTA ACGGCTTTCA TGAACGTGCG CAGTGCGCGT
TTCAGCTTCA AGGAATATCC CGAGTTCAGC TTTGCCGATC CCTGGTACGA TCCGGACAAG
CAACCGCTTC AGATCAGCGA AGAACTGAAC GTTCAAACCA CCGATGAACA AGGCCAAGCC
GAATTCACCT TGCCGCTGGA GCGTTTCAAC GCCGGAACCT ACCTGCTGAC CCTGACCACC
GAAGGATTCG AACCCGGTGG CGGGCGTAGC GTCACGGCGC GCAACAGCGT GCTGCTATCC
CCTCTCAAGA CCCTCATCGG CACCAAAAGC GACGGCAAGC TGGACTACAT CCACAAGGAT
GCCGAACGCG TTATCGACCT CCTTGCCATC GGCACCGATC TACAACCCCG CGCCGTGGAA
GGACTGCGGG CGCGACTCGC GGAAATCCGC AGCATCTCGA CCCTGGTGCA ACAGCCCGAC
GGCACCTACG CCTACCAGTC GATGGAAAAG GAGCAGGAGC TGCACATACA GGACTTTGCC
ATAGACGCCA GCGGTAGCCG TTACCGACTG CCCACCGACC GCCCCGGCAC CTACGTGTGG
GAGATTCTCG ATGCGCAGGG CCTGAAACTG GCACGGGTGC GCTTTACCGT AGTCGGTCAC
GGCAACCTGC TGGGACAACG GGAAAAGAAC GCCGAACTCG ATCTCAAACT CGACCGCAAC
GACTATAAGG CCGGCGACAC CATCGAAATG AACATCACCG CCCCTTATAC CGGCAGCGGT
CTGATCACCA TCGAAAGCCA CCGGGTGCAC ACCTGGAAAT GGTTCAGCGC CGACACAACC
AGCAGCATGC AGACCATCAC CATCCCCAAA GACCTGGAGG GCAACGCCTA TGTCAACGTC
GCCTTCGTGC GCGCCGCCGA CTCCCGGGAG ATTTTCACCA GTCCCTTGAG CTACGCCGTG
GCGCCTTTCA CCATCGATCG CGGCAAGCGC ACCCTTGATG TGCAGCTGGA TGTGGCGTCC
AAAGCGCGGC CCGGGGATCG CATGGAAATC AACTACAGCA CATCCCGCCC TTCGCGTATC
GCCGTGTTTG CGGTCAACGA GGGCATTCTG CAGGTGGCAA AATATAAAAC GCCGCAACCC
CTCGATCACT TTCTGCGCAA ACGTGCCCTG CAGGTCGATA CCCTGCAGAT GCTCGATCTA
CTGCTGCCGG AATTCGATCT GATCCGCCGG CTTTCCGCCA GCGGCGGCGG CATGGCCGAC
GAAAGCATGC GCAAAGCGCT GGCCGCCAAC CTCAACCCCT TCGCTCGAGC CCTGGACAAA
CCGGCGGTTT TCTGGTCAGG CATTCTCGAT GCCGATAGCC AGAAACGCAG CGTAAGCTTC
ACGGTGCCCG ATACCTTTGC CGGCACCCTG CGTATCATGG CCGTGGCGGT GGCCGAAGAG
GCCATCGGCG TGGCGGAAGA ATCCAGCCTG GTACGAGGCC CCTTCGTCAT CACGCCCAGT
CTGCCGACCC AGGCGGCTCC CGGAGACAGT TTCCGCACCT CGGCCAGCAT CAGCAACATC
CTCGAAGGCT CGGGCAAGAA CGCCCCGGTC AGCGTACGCC TGGAAGCTTC CGAACAACTG
GACATCATCG GCGATAAAGA ACAACGGCTG ACCATCAGCG AAGGCAGCGA AAAGACTCTT
CACTTCCAGC TGCGCGCCAA GGACAAACTA GGCGCGGCCC AAGTGCGCTT CATCGTCACC
TCGGGCAAGG AGCAGGCCAC GCGCCGCGCA ACCCTCAGCA TCCGTCCGGC ACTGCCCTAC
ACCACCACCC TGAGCAGCGG CTACAGCAAA AATGGCAAGG CCCAGCTGAA GGTGCCGCGC
AGCTTATACG CCGATCTGGC CGAACAGCGG GTAGCGGCAT CAAGCAGCCC ACTGGTTCTC
ATCGACGGCC TGTCGTCCTA CCTGGAACAC TTTCCCCACG GCTGCACCGA ACAGGTTGTC
AGCCAGGTTT TCCCGCTGGT CGGACTGATG AGCCATCCGG CCTTTGCGCC ACACAGCAAA
GACAACCGAC AGCGCTTCGC CACGCTCATC GCCAGGCTGC GCGAGCGGCA ACTGGCCAAC
GGCGGTTTCT GTTTCTGGCC CGGCGGCAGC GAGGTGGCGG AATTCCCCAG CGTCTACGTC
ATGCATTTTC TCCTCGAGGT CCGCGCTCTC GGCTACGCCG TACCCGAGGA CCTCATGACC
CGCGGCCGCG ACTACCTGCG CGACTATGTC GGCAACCAGC CGGCCGATCT GGAACAGGCA
CGGGTGCGTG CCTACGCCAT CTATCTGCTG ACCCGCATGG GCGAGGTGAC CACCAACCAC
CTGATCAACC TGCAGACCTG GCTGGACAAA CACCAGCCGA AAATCTGGCG GCAGGATCTG
GCGGCAGCTT ATATGGCATC CGCCTACGGG CTGCTTCACA TGCAGGATGA TGCCAGGGCG
CTGATCAGCC ACTACCCCCT CGGCGCCAAG GACAGCGGTA AAGACGGTAT CTTCCATTCG
GCATTGACCC GCGACGCCCA GTTCGTTTAC CTGCTGGCGA AGCATTTCCC GAACCGGGCG
GCAAAGCTCG ACGGCGAGGC ATTGCTGCGA TTTGTCGAAC CGGTATTCCG CGGCCGCTAC
AACACCATTT CCGCCGCCTA TACCATCCTG GCGCTGGGCG CTTACGGCCA ACTGCAAACC
TCGCCGCTGC GGGAGGAGGC CATCCGCATT ACCGCCGTAG ATCGCAATAA AGGCGAACAT
CCGTTGGCGA TCGAGCAGCA ACCCTTACCC CAAGCGGCCT TCGGCACGGA TACCGCCAAG
CTGCTGGTAG CCGCCGACAA GGCGCTGTTC CACCTGCTGT CCCAGGCCGG GTTCGACCGC
GAGATGCCGA CGACCCCGGT GCGCGACAAG CTGGAAATCA CCCGCGAGTA CCTGAATGGC
AACGGCAAGC CGGTTACCGA GCTGCAACAG GGCCAGGAAG TCACCGTGCG CCTGCGGGTG
CGGGCGCTGA ACGAACCGGT TTCCAACGTG GCGGTCATTG ACCTGCTGCC GGGCGGCTTC
GAGGTGCTGC GCGATTCGGT GCCGCGCACC GCCGTCGGCT GGCGGGCCGA CTATGTCGAT
GTACGCGAAG ACCGGGTGGT CTTTTACGGC CGCTTCGATA CCACGGCACG GGAACTCAGC
TACCGGGCCA AGGTCACCAG CGCCGGCCAG TTCGTCATCC CGCCGCCCTT TGCCGAAGCC
ATGTACGATC GGGCGGTACG CGCCTCCGGT GTGTCAGGGA CATTCAACGT CACGCCGTCG
GACTCCGGCG GTTCTTGA
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| Protein sequence | MKRLLRAVRL GINKLAGSFS WTPPPWAAAL QRTRKQSPKR FWSGLGLLAL LAFAVVAGYG
YYRHLPRPLL LTADIEAPGI TPNDETLQPD ALRVSFRYNT QRLQPEQQIP EIMPSVARLD
LVDQRIETGI RLKPAISGTW SWEGDRTLIF VPDREWQAGT RYRLRFDKQL FSPESRFSSL
DYTFDTPAFD VDLDNLEFYQ DPRNRKIRQA VATLRFSHPV DAQSLEKHLA LSMHPSDKDS
KASPQKVGFT LSYDKNQREA YVHSMPLQLP EHSNYLRLSL QAGIAPAIGG EPSTRQLAKE
LLIPDRLSFL KVEEAEAIIV RTSTNEPQQV LRLRFTDDIT EAELKDKLQA WLLPPRNPQR
NSSRWRSPRE VTSAILAQAT PVPLVPLETE HGFSREFHLP LDAPPGGTLY LRLKPGLTSL
GGFVHASFYD TLLRAPTYPK ELQIAADGAL LSLAGSHRLG LMTRGLDAFQ VRIGKLLPGQ
LQHLISQTYG DLSDPDFASY RFDEDNIVEY AQQIIDLKQL PPQQANYASV DLSAYLPSDR
DRCGLFFVEL CGWDKTRKRK MSWVSDKRLI LVTDFGLLVK DNADRSHDVF VRSFGNGQPV
AGARVTLQGR NGLPLLTRTT DAEGHVKFPS TKGFRNEQQP TAYVVTTADD MAFIPFERRT
RQLNFSRFEV GGVRDRQRNG QSLGAFLFSD RGLYRPGEQV AIGCIVKAQP LNNIEGIPLE
IAIRNPRGTE VASKRLKLPA KGFFDYPYAT QAASETGTYQ VALYLVRDNN HRGRMIGLDQ
FRVEEFQPDT LKIRSTLLGI EERGWSTATR LTARVGLRNL FGTPAQGRKV TAFMNVRSAR
FSFKEYPEFS FADPWYDPDK QPLQISEELN VQTTDEQGQA EFTLPLERFN AGTYLLTLTT
EGFEPGGGRS VTARNSVLLS PLKTLIGTKS DGKLDYIHKD AERVIDLLAI GTDLQPRAVE
GLRARLAEIR SISTLVQQPD GTYAYQSMEK EQELHIQDFA IDASGSRYRL PTDRPGTYVW
EILDAQGLKL ARVRFTVVGH GNLLGQREKN AELDLKLDRN DYKAGDTIEM NITAPYTGSG
LITIESHRVH TWKWFSADTT SSMQTITIPK DLEGNAYVNV AFVRAADSRE IFTSPLSYAV
APFTIDRGKR TLDVQLDVAS KARPGDRMEI NYSTSRPSRI AVFAVNEGIL QVAKYKTPQP
LDHFLRKRAL QVDTLQMLDL LLPEFDLIRR LSASGGGMAD ESMRKALAAN LNPFARALDK
PAVFWSGILD ADSQKRSVSF TVPDTFAGTL RIMAVAVAEE AIGVAEESSL VRGPFVITPS
LPTQAAPGDS FRTSASISNI LEGSGKNAPV SVRLEASEQL DIIGDKEQRL TISEGSEKTL
HFQLRAKDKL GAAQVRFIVT SGKEQATRRA TLSIRPALPY TTTLSSGYSK NGKAQLKVPR
SLYADLAEQR VAASSSPLVL IDGLSSYLEH FPHGCTEQVV SQVFPLVGLM SHPAFAPHSK
DNRQRFATLI ARLRERQLAN GGFCFWPGGS EVAEFPSVYV MHFLLEVRAL GYAVPEDLMT
RGRDYLRDYV GNQPADLEQA RVRAYAIYLL TRMGEVTTNH LINLQTWLDK HQPKIWRQDL
AAAYMASAYG LLHMQDDARA LISHYPLGAK DSGKDGIFHS ALTRDAQFVY LLAKHFPNRA
AKLDGEALLR FVEPVFRGRY NTISAAYTIL ALGAYGQLQT SPLREEAIRI TAVDRNKGEH
PLAIEQQPLP QAAFGTDTAK LLVAADKALF HLLSQAGFDR EMPTTPVRDK LEITREYLNG
NGKPVTELQQ GQEVTVRLRV RALNEPVSNV AVIDLLPGGF EVLRDSVPRT AVGWRADYVD
VREDRVVFYG RFDTTARELS YRAKVTSAGQ FVIPPPFAEA MYDRAVRASG VSGTFNVTPS
DSGGS
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