| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0524 |
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| Symbol | |
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| ID | 3723218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 634594 |
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| End bp | 636087 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637750110 |
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| Product | periplasmic binding transport protein/transglycosylase |
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| Protein accession | YP_355954 |
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| Protein GI | 77918139 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.60685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGG AGGATGCAGG TATGAAGAAG AAACAAGTCG TATGGCTTTT ATGTCTTGGA
CTGGCTGTTA TTTTGAGCTT TTTCGGAGTG TATTCTTTAC AGGATTCCCC TCTCCGGAAA
AAGGATTTAA ACGCGGTTTC TCAAAAGGGG AAACAGCATG GGATCTCACT GGGCGAGCAT
TTATCCACGA GTTATAGGGT TGACCTGCCG GGGCTTATTG AAAAGAGATA CATTCGTGTC
CTGACAACAC TGAATCGGAC CAATTTTTAT GTCGCCAATG GCCAGCCGGT AGGTTTTGAG
TATGAGTTAC TCAAAGGATA TGAAAAATTT CTCAACACCA ACATTTCCGA TAAAAACCTG
CAGATCGTGT TTGAGTTCAT TCCGGTGGAC AGGGACGAAC TGATCCCGAA GCTGATCCAG
GGCTATGGGG ATATAGCGGC TGCGGGCCTG ACCATTACAC CGCAGCGAAA TAAGCAGGTC
AATTTTACCG ATCCGTACCT GCGCGGGGTG GCCGAAGTTG TGGTGGGCCG TAAAAAGGAT
ACCCCACTTG AAACGGTCGC CGATTTAAGC GGCAGAAAAG TTGCGGTGCG TCAAAGCAGC
AGCTATTTCC AAAGTTTGAA ACGCCTCAAT CAGGAATTCA GCCGCCAGGG CCTGGATCCG
GTGAACATCG TCACCTTGAG CGAGGACCTG GAAACCGAGG ATATTCTCGA AATGGTCAAC
GCCGGATCGC TGCCATTGAC GGTTGCCGAC AGCCATATAG CGGCGGCGTG GAAAGAGGTG
CTGCCTTCCC TTGCTGTTTA CGACGATATA AAGCTCAGAG AGGGAGGGGA CATCGCCTGG
ATGGTGCGCA AGGGCAATCC GAAACTCAAA AAAAGCCTGA ACCGGTTCTT GCGGACCCAT
AAAAAGGGCA CATTGCTGGG AAATATCTAT TTCAAGCGAT ACTATGAAAA CGCCAAAAGG
TTAAAAGATC CGACCGATCT GGAACATTGG AAAAAGGTGC GCCGATACGA GCCGATTATC
CGCAAGTATG CCGACCGCTA CCAGTTCGAT TGGCTGCTGA TACTGGCCCT TGCGTTTCAG
GAGTCCGGGC TGGATCCATC GCGCAAAAGT CACGCCGGCG CTGTGGGCAT CATGCAGATT
CGCCCTTCTA CGGCCAGGGA TCCCCATATC AATATCGATC ATGTGGAGGA TGTTGAGAAT
AATATTCATG CCGGGGTGAA GTATCTCGCT TTTCTTCGGG ATCATTACTT CGGTGCAGAG
GATATTCGGC CGCGGGACAG GACCCGGCTG GCCTTGGCTG CCTATAACGC CGGCCCCGCC
AAAATACGCA GGCTCCGGGC GCGGACAAAA AAGGTGGGGC TGGACGAAAA TCAGTGGTTT
CGAAACGTGG AGCTGGCGGC CCTGCGGTCC ATAGGGCAGG AGACTGTGCG CTATGTGAGT
AATATCAATA AGTATTACGT GTTGTATCAG ATTCTTGAAC GCGAGCAGGG CTAG
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| Protein sequence | MKAEDAGMKK KQVVWLLCLG LAVILSFFGV YSLQDSPLRK KDLNAVSQKG KQHGISLGEH
LSTSYRVDLP GLIEKRYIRV LTTLNRTNFY VANGQPVGFE YELLKGYEKF LNTNISDKNL
QIVFEFIPVD RDELIPKLIQ GYGDIAAAGL TITPQRNKQV NFTDPYLRGV AEVVVGRKKD
TPLETVADLS GRKVAVRQSS SYFQSLKRLN QEFSRQGLDP VNIVTLSEDL ETEDILEMVN
AGSLPLTVAD SHIAAAWKEV LPSLAVYDDI KLREGGDIAW MVRKGNPKLK KSLNRFLRTH
KKGTLLGNIY FKRYYENAKR LKDPTDLEHW KKVRRYEPII RKYADRYQFD WLLILALAFQ
ESGLDPSRKS HAGAVGIMQI RPSTARDPHI NIDHVEDVEN NIHAGVKYLA FLRDHYFGAE
DIRPRDRTRL ALAAYNAGPA KIRRLRARTK KVGLDENQWF RNVELAALRS IGQETVRYVS
NINKYYVLYQ ILEREQG
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