| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0513 |
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| Symbol | |
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| ID | 3723207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 623003 |
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| End bp | 624283 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637750099 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_355943 |
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| Protein GI | 77918128 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 68 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATAG AAGCCGATTG TTTTCCCATT GCAACGGAAC CCAGCGAAGA TCCCAGACAA
TTATTGCGCA GGTTTTTATG GCTTGGGCTG CTTTGTGTTG CGCTACTGTT GGCGCTGGCA
ACCTACGGTG TCTACCGGGT TTATAGCTGG CGGTTGGTGG AAAGCGCCCA TGCCGAGGCG
CAAGCTATCT GCCAGGTGGT TTTGGTGAAG GAAAAAAGAC AACTTCTCGA CATAGACAAT
GACGGAAACG TTCGGTTGGT TGTGGCAGAG GATCATCGGG CGGATTTTAA CCGGCGTATG
CGGCAATACC TCAAACCCTA TGCTGTCGAT GCGGTGCGGA TCTGGGACAG GCAGCTTCGT
CTCGTCAACA GCAGCGGTAA AGAACAAAGC GATCATGGCC AGGCAAAATC CCCGCTCCTT
GCCAAAGCCC TTGCCGGGCA GAGTTTTTCC CGGTTGGAAA AGAATGGTTC CGTTTATGCC
GCGGAATCGA AGCCTGAAGG TGCGCATGGG CAAATGGTCA GTTATTTGCC GATCTGGGGG
CGCCACAAAA CGGTTTTGGG GGCGATTGAA ATCCGGCGGA ATATGGAAGA GATCAGTGCG
CAACTTCTTC GCGCCGTGAC CTTTTCCGGC ATAGTGCTGG CCGCCCTATT GTCTGCCCTG
TTTTCCTGTA TTTATCTGTT GGTCAGAAAA GGCGCTGTAC GTCTGGCCAA AGCCCAGGAA
GATTTGCGCT GGCTCGCTAC GACAGACCCC TTGACCGGGG TGTATAACCG CCGGGAAGTT
CTGGCCAGAA CCGAAGAACT ATTATCACAA TGGAGGGCCG GGGGGGATCG GAACGCATCT
TTTGTCAGTG TGTTGATGGT CGATTTCGAT AATTTCAAGA TCATCAATGA TACGTACGGT
CACCCGGTCG GGGACAGGGT GTTGCAGGAA TTGGCTGCGC GCATTCAGTC ATGTCTCGAA
CCGAAGGACA TCCTGGGGCG TATGGGGGGC GAAGAGTTTC TGGTCGTTCT GCCCGGGGTC
GGGGTCTCCG CCTGCCGCGA AATTGCCGAA CGCTTATGCC AGGCTGTCTG CGGGACGCCC
TTTGACCCCG AAAACTATCG GATTTCCGGG TCCATCAGTG TGGGCATGGC AACGATGCGA
GCCCATGGCG GCAGTGTGGA TGCCATGCTT CACGACGCTG ATCAGGGTTT GTATGTGGCA
AAAAATAGCG GTAAAAATTG CGCATCCCTG GCCGCAGAAC TGCCGTCCGA TCCGGATTTT
TCGGGGAAAT GGGTCGACTG A
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| Protein sequence | MAIEADCFPI ATEPSEDPRQ LLRRFLWLGL LCVALLLALA TYGVYRVYSW RLVESAHAEA
QAICQVVLVK EKRQLLDIDN DGNVRLVVAE DHRADFNRRM RQYLKPYAVD AVRIWDRQLR
LVNSSGKEQS DHGQAKSPLL AKALAGQSFS RLEKNGSVYA AESKPEGAHG QMVSYLPIWG
RHKTVLGAIE IRRNMEEISA QLLRAVTFSG IVLAALLSAL FSCIYLLVRK GAVRLAKAQE
DLRWLATTDP LTGVYNRREV LARTEELLSQ WRAGGDRNAS FVSVLMVDFD NFKIINDTYG
HPVGDRVLQE LAARIQSCLE PKDILGRMGG EEFLVVLPGV GVSACREIAE RLCQAVCGTP
FDPENYRISG SISVGMATMR AHGGSVDAML HDADQGLYVA KNSGKNCASL AAELPSDPDF
SGKWVD
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