| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0492 |
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| Symbol | |
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| ID | 3725879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 598796 |
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| End bp | 599905 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637750078 |
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| Product | transport protein |
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| Protein accession | YP_355922 |
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| Protein GI | 77918107 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 87 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGAG CATTCTGGGG AGTATCGCTT TTCGGCATCC TGGGCCTGGT CGCCATAGGC
CTGGCATTGG CTCCGGGCTG CAGCAAAGCC AAGAAAGAAA CCTTGCGCAT CACATGCTGG
GGCGGCTATG CCAAACCCTA TGTGGCCGAT TTCCAGAAAC TGGTCAAGGA AAAGTACAAG
GTCGACGTTG AGGTCCAGAT CACCAATCCC ACCGACCAGG ACGAGTTTTT CATGGCGGTG
AAAAACAATA CGGCGGATCT GATCTCACCA CCCATCGAAC TGCCAAAAAT CCCGCGTTTT
TATGCCTATG ACGAGCAGAC CCCTTATCTT CAGCCGGTGG ATATCAACAA CATTCCCAAT
CTCAAGAACA TGATGCCGGT ATTCCGTGAC GATACCACGC CCATATTCGC TGGTAAGCGT
TACGGCGTAC CGTACAATTG CGGTCCTTAC GGCCTGGCCT ACAACACGGA TGTGATCGGC
ACTACTCCAG CTACCTGGAA TATCCTATGG GAGCCCCGTT ACGCCGGCAA GTACACCATC
AACAACAACT TCCCCAAGGT CAACGTCTGG ATCACTGCAC TGGCCCTCGG CTACGACTAT
GCGGATATCT TCGATATCGG GAACCTCGAC CGGGATAAAG TTCAGCAGCA ACTCAACGTT
CTGGCCAAAA ACGCCAAGAG CCTCTGGGAT GGTGCCGCCA ATCCGGATGA GTTCCCCGAA
TTATCGCTAG CCACCACCTG GGGATTTGCC GCCCAGCAAG CCAATCTTAA AGGCGGCAAC
TGGCTGTTGG CCAGTCCCAA GGAAGGCGGG ACGGCCTGGA TCGACTGCTG GTACGTCGGT
GCTGGAGCCG AGGATATGAC CAAGACTTTA GCCGAGGAGT GGATCAACTT CATGTTGGAC
CCGGCCCGAC AGGCTGACGT GGTCAAATCC CAGGGAGTGT CCCCGGTCAT TGCCGATGTC
GGCGAACTGC TCGACGCCAA GGAACAAGCC ATGTTCCATG TCGGGGATGA AAATTACTTC
AAAAGTGTTG CCTTGTGGAG GGTCATGACC GAGGAAACGG AAAAAGCATT CAACGACATG
TGGGAGGAGG CGAAAAAACA CAGGGAATAG
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| Protein sequence | MRRAFWGVSL FGILGLVAIG LALAPGCSKA KKETLRITCW GGYAKPYVAD FQKLVKEKYK
VDVEVQITNP TDQDEFFMAV KNNTADLISP PIELPKIPRF YAYDEQTPYL QPVDINNIPN
LKNMMPVFRD DTTPIFAGKR YGVPYNCGPY GLAYNTDVIG TTPATWNILW EPRYAGKYTI
NNNFPKVNVW ITALALGYDY ADIFDIGNLD RDKVQQQLNV LAKNAKSLWD GAANPDEFPE
LSLATTWGFA AQQANLKGGN WLLASPKEGG TAWIDCWYVG AGAEDMTKTL AEEWINFMLD
PARQADVVKS QGVSPVIADV GELLDAKEQA MFHVGDENYF KSVALWRVMT EETEKAFNDM
WEEAKKHRE
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