| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0454 |
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| Symbol | btuB |
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| ID | 3723437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 552419 |
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| End bp | 554359 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637750040 |
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| Product | TonB-dependent outer membrane receptor for cobalamin and Fe transport |
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| Protein accession | YP_355884 |
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| Protein GI | 77918069 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000000108252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAAAA TCCCGTCTTT GGCCCTGGTC GGTTTGCTGA TGCTTTCTGC CACCGCATCT
GCATCCGACG TAACCACCCT CGAACCGGTT GTTGTAACCG CCACCAAAAT CGAAACACCC
ACCCGCGAAG TAGCAAGTTC TATTACCGTT GTCACGGCCG AAGAGATTGA AGAGAAGCAG
CAGCGCACGG TGCTTGAAGC TCTGCGTGAC GTCCCCGCTG TAGATGTAGT ACAATCGGGC
GGCGACGGTC AGCAGACCTC CGTCTTTATG CGTGGTGCGA ACTCCGAACA CACACTGGTC
CTTATTGACG GCATTGAAGT CAATGATCCC ATCTCCCCAA GCAAAGCATT CAACTTCGCA
AATTTAACGA CAGATAATGT TGAACGTATC GAAATCCTTC GAGGACCGGC AAGCGCCCTC
TACGGTTCGG ATGCCATCGG TGGCGTCATC AACATCATCA CCAAAAAAGG CCAGGGCAAA
CCGAGCATAA CCCTCTCCGC CGAGGGCGGA TCCTTTGAAA CACACCATGA AACGGTGTCC
TTAAGCGGCG GCACGCAACT TGTCAATTAT GCTCTGTCTG CTTCCTATCT GGACTCCAAC
GGCATAACTG CCGCGCGCTG GTCCGACGGC AATCATGAAC GGGACGGCTA CGAGAACCTG
ACCACTTCCC TCCGACTGGG TCTTACGCCG ACCAAGAACT TCGATCTCGA CTTTATCCTG
CGGTACATGG AGACGGATAC GGATATCGAC AATTCCGCCG GCCCCCTGGG CGACGATCCG
AACTACACGA CCGAAGAGGA AAAGCTGTTT TTCCGTACCC AGGCAGGCCT GTACCTTTTC
GATGACCTAT GGGAACAAAA ACTCGGCTTC TCCATTACGG ATTACGACCG GTCCACCCGC
GATGATACCG ACGCCGCGCA CCCCTTGGAC TGGGTGCGGA GCAGCTACCA AAGCACGTTG
TACAAAGTCG ACTGGCAACA CAATCTTTAC CTCCACAAAA CCAATACTCT TACTCTGGGC
ATTGAACACG AGGAAGAGGA AGGTAAAAAC AAGTTTCTGT CTGAATCGGC GTATGGCCCT
TGGAACACCT ATTATCCAAG ACAGAAAACC CGCACCACCG GCTATTACGT GCAGGATCAG
TTCAAACTGT GGAATCGCTT TTTCACTACC CTTGGCTTGC GCCTCGACGA CCACGAGGAA
TTTGGTCGAC GTGTCACCTA CCATGTCGCT TCGAGCTACA TATTTGATTC CACAGGAACA
AAAATTCGCG CCACCTGGGG CACCGGCTTC AAGGCCCCCT CTCTGGTCCA GCTCTACGAC
ACCAATTTCG GTGGCAACCC TGACCTGAAT CCTGAAAAAA GCGAAGGCTG GGATGTTGGC
ATCGACCAGA ACCTGTGGCA GGATCGCTTG ACCATCAGTC TGACCTATTT CGAGAATTCT
TTTGAAGACC TCATCGTAAA TGAATACCTT GGATGGGGAC CAACAGGGGC GATTTATCTT
TATAAAAACG TCGACTCGGC AAACAGCAAA GGCATTGAAC TGCTTCTTAC CTGCCGCCCC
CTGGAGACCT TGACCATCAC TGCAGGCTAC ACCTATACCG ACACGGAGAA TGAAGACAGC
CACGACCAAC TGCTTCGCCG TCCCCGCAAC AAGTTTACAG CAGATATCAA CTACCGGTTC
CTGGAAAAAG GCAACGTGAA TCTCAGCATG ATCTACGTTG GCAAACGGGA GGACAGCTTC
TACAACAATG CAACGTGGGC AAGCGGGCGC GTTGAACTGG CCAGCTATAC ATTATTCAAC
CTGGGTGCGT CCTACGAAGT TACCAAATGG CTCACCCTTT CGGGTCGCAT TGAAAATCTG
TTGAATGAAC ATTACGAAGA AACATGGGGC TATGACACCG CAGGCATCGC GGGCTACATG
GGCGCCAAAT TGACCTTCTG A
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| Protein sequence | MVKIPSLALV GLLMLSATAS ASDVTTLEPV VVTATKIETP TREVASSITV VTAEEIEEKQ
QRTVLEALRD VPAVDVVQSG GDGQQTSVFM RGANSEHTLV LIDGIEVNDP ISPSKAFNFA
NLTTDNVERI EILRGPASAL YGSDAIGGVI NIITKKGQGK PSITLSAEGG SFETHHETVS
LSGGTQLVNY ALSASYLDSN GITAARWSDG NHERDGYENL TTSLRLGLTP TKNFDLDFIL
RYMETDTDID NSAGPLGDDP NYTTEEEKLF FRTQAGLYLF DDLWEQKLGF SITDYDRSTR
DDTDAAHPLD WVRSSYQSTL YKVDWQHNLY LHKTNTLTLG IEHEEEEGKN KFLSESAYGP
WNTYYPRQKT RTTGYYVQDQ FKLWNRFFTT LGLRLDDHEE FGRRVTYHVA SSYIFDSTGT
KIRATWGTGF KAPSLVQLYD TNFGGNPDLN PEKSEGWDVG IDQNLWQDRL TISLTYFENS
FEDLIVNEYL GWGPTGAIYL YKNVDSANSK GIELLLTCRP LETLTITAGY TYTDTENEDS
HDQLLRRPRN KFTADINYRF LEKGNVNLSM IYVGKREDSF YNNATWASGR VELASYTLFN
LGASYEVTKW LTLSGRIENL LNEHYEETWG YDTAGIAGYM GAKLTF
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