Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0453 |
Symbol | |
ID | 3723436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 551415 |
End bp | 552284 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637750039 |
Product | TonB-like protein |
Protein accession | YP_355883 |
Protein GI | 77918068 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000000000832201 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTCGC AGGAAACGTT TCTCCCATGG ATTATCCTGT CCCTGGGCAT CCATATCACG GCGTTGACCT TATGGCCGCT GCCACCGTCA TGGGAAGCCA CCAGACCAGG CCCCATTGCC GTGGATCTGC GTTACAGCAC GCAACCTGGA GGCAACAACC AACCGAACAA AACACCAGGG CCCGGCACGC ATGGCCCAAA GGCCATAATG CCGCCGAAGG TCTTGCATCC TCATCCGAAA CCGGCGCCTC CACACAAATC AAGTCGGCCT ATAACTCCTC CTGCACCGAT AAAAAAAGCT GCACCACACA GAACTCCCCG AAAGAGCCAA TCTCAAAAAT CGGCGCCGGC AGCGATCTCG GCCCCTGAAC AACAGCCTGA AAAGTCATTG GAGCCACCTT CCGACCAACC CGAATCGGAC CTCGCCGACA CCTCGATGGA AAACCTGAAT GGCGCAGCAT CTGCAACAGA CGATACCAAC GCCAGCCATG CTTCCTTGTC GCCAGCAAGC GGAACAGGCA CGGACAACAC GGGATACGGT AGCGGGGAGA ACAGCGGGAC TAACGGTGGC GGCGGAGGCG ACGGCATCAT ACGCGCAACC CCATTAGGCT ACGGCGAGAA CCCACCCATG CCTTATCCGC GCAGCGCCCG ACGCAGAGGA TGGGAGGGAG AGGTGCTGCT GAAGGTCGAT GTGTCCGCGC ACGGCCGGGT CCTTGCCGTG CATATCGAAC AATCGTCAGG CTATGGCATC CTCGACGATA CCGCCCTTGG GGCAGTTTCC GAATGGCGCT TCCGCCCTGC CAGGGTTAAC GGCTCAACTC GCCCCGATAC GGTGATCGTC CCGATCCACT TCAGACTCGA TGCTCCCTGA
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Protein sequence | MLSQETFLPW IILSLGIHIT ALTLWPLPPS WEATRPGPIA VDLRYSTQPG GNNQPNKTPG PGTHGPKAIM PPKVLHPHPK PAPPHKSSRP ITPPAPIKKA APHRTPRKSQ SQKSAPAAIS APEQQPEKSL EPPSDQPESD LADTSMENLN GAASATDDTN ASHASLSPAS GTGTDNTGYG SGENSGTNGG GGGDGIIRAT PLGYGENPPM PYPRSARRRG WEGEVLLKVD VSAHGRVLAV HIEQSSGYGI LDDTALGAVS EWRFRPARVN GSTRPDTVIV PIHFRLDAP
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