| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0445 |
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| Symbol | sdhA |
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| ID | 3723158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 543849 |
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| End bp | 545762 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637750031 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_355875 |
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| Protein GI | 77918060 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.000586543 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATACTCG ACGGCAAATG CCCAACCGGA TCGCTGGCGG ACAAGTGGGA CAAACATCGC
CAGGACCTCA AACTGGTCAA TCCGGCCAAT AAAAGAAAAT TCAAGATCAT CGTCGTCGGC
ACCGGCCTGG CCGGTGCCTC CGCCGCAGCA ACCCTTGGCG AACTCGGATA TAAGGTAGAA
GCGTTCTGCT ATCAGGACAG TCCGCGCCGA GCCCACTCCA TTGCAGCTCA GGGCGGGATC
AACGCTGCCA AAAATTATCC GAATGACGGC GACAGTATCT ATCGCCTCTT CTTCGACACC
ATCAAGGGTG GCGATTTCCG GGCCCGCGAA GCCAATGTCT ACCGGCTGGC ACAGATCAGC
AACGCCATCA TCGACCAGTG CGTTGCCCAG GGGGTACCTT TTGCCCGCGA CTACGCCGGT
TACCTGGAAA ACCGCTCATT TGGCGGCGCG CAGGTTTCCC GTACCTTCTT CGCGCGCGGC
CAGACCGGAC AACAGCTCCT GCTGGGAGCC TATCAAGCCC TGTCCCGCCA GATAGCGGCA
GGCACGGTAA CGCCGTTCCC CCGCACCGAA ATGCTCGATC TGGTACTGGT GGACGGCCAT
GCCAAGGGCA TCACGGTACG CGACCTCACC ACCGGCGAGA TCCGCTGCCA TGCAGCCGAT
GCCGTTATCC TGGCAACCGG CGGCTACGTC AACGTCTTCA ACCTGTCGAC CAACGCCATG
GGCAGCAGCG TCACCGCAGC CTGGCGCGCC CACAGAAAAG GCGCATTCTT TGCCAATCCC
TGCTTCACCC AGATCCATCC GACCTGCATT CCGGTCACCG GGGATCACCA ATCCAAATTG
ACCCTGATGT CCGAATCGCT GCGTAACGAC GGCCGCATCT GGGTCCCGAA AAAGGCTGGG
GACAAGCGGC GTCCGCAGGA CATCCCCGAG AATGAGCGCG ACTACTATCT GGAACGCAAG
TACCCCAGTT TCGGCAACCT GGCGCCGCGC GACATCGCTT CCCGCGCTGC CAAGGAAGTC
TGCGATGCCG GCTTTGGCGT CGGGGCCGGC GGCCGGGGCG TGTATCTCGA CTTCGGCGAT
TCCATCGTGC GCCTCGGCGA GGATGCCATT CGCACCCGCT ACGGCAACCT GTTCGAAATG
TATCAGCGCA TCACCGATGA AAACGCCTAC AAGCAACCGA TGCGGATCTA CCCGGCGCCT
CATTACAGTA TGGGCGGCCT GTGGGTCGAC TACAATCTGC AGAGCAACAT CGATGGATTG
TTCGTCCTCG GCGAAGCCAA CTTCTCCGAT CACGGCGCCA ACCGCCTGGG TGCCAGCGCC
CTGATGCAGG GTCTGGCCGA CGGTTACTTC ATTATCCCCT ACACCATCGC CGACTACCTG
GCCCGCACCT CGCCGGGACA GGTCGACAAC ACCCATGAGG CGTTTCGCCA GTCCCGCGAG
CAGGTGGATG AGCAGGCCGG ACGCCTGCTG GCCATCAACG GCCGCAAAAC CGTCAGCGAA
TTCCACCGCG AACTCGGTCA CATCATGTGG GAAAATGTCG GCATGGCACG TAGCGCCTCC
AGCCTCACCG AAGCGCTCGA CCGCATTCCC GCGCTGCGCA ACGAGTTCTG GGAAAACGTC
AAGATCCCCG GCACCGGTCA GCAGTTCAAT CAGGAACTCG AAAAGGCCGG CCGCGTCGCT
GATTTCCTTG AATTCGGCGA ATTGCTGGCC CGTGATGCGT TGCAGCGCGA GGAGTCTTGC
GGCGGACATT TCCGCACAGA ACATCAGACC GCGGACGGCG AGGCACTGCG TAACGATGCC
GACTATGCCC ACGTGGCTGC CTGGCAGCAC AAAGGTGCCG ACCAGACTCC CGAACTGCAC
AAGGAACCGC TGACTTTCGA AAATGTTGAA CTGGCTGTAA GGAGCTACAA ATAA
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| Protein sequence | MILDGKCPTG SLADKWDKHR QDLKLVNPAN KRKFKIIVVG TGLAGASAAA TLGELGYKVE
AFCYQDSPRR AHSIAAQGGI NAAKNYPNDG DSIYRLFFDT IKGGDFRARE ANVYRLAQIS
NAIIDQCVAQ GVPFARDYAG YLENRSFGGA QVSRTFFARG QTGQQLLLGA YQALSRQIAA
GTVTPFPRTE MLDLVLVDGH AKGITVRDLT TGEIRCHAAD AVILATGGYV NVFNLSTNAM
GSSVTAAWRA HRKGAFFANP CFTQIHPTCI PVTGDHQSKL TLMSESLRND GRIWVPKKAG
DKRRPQDIPE NERDYYLERK YPSFGNLAPR DIASRAAKEV CDAGFGVGAG GRGVYLDFGD
SIVRLGEDAI RTRYGNLFEM YQRITDENAY KQPMRIYPAP HYSMGGLWVD YNLQSNIDGL
FVLGEANFSD HGANRLGASA LMQGLADGYF IIPYTIADYL ARTSPGQVDN THEAFRQSRE
QVDEQAGRLL AINGRKTVSE FHRELGHIMW ENVGMARSAS SLTEALDRIP ALRNEFWENV
KIPGTGQQFN QELEKAGRVA DFLEFGELLA RDALQREESC GGHFRTEHQT ADGEALRNDA
DYAHVAAWQH KGADQTPELH KEPLTFENVE LAVRSYK
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