| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0442 |
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| Symbol | metE |
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| ID | 3723155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 539013 |
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| End bp | 541289 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637750028 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_355872 |
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| Protein GI | 77918057 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000063505 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACAC ACACGCTCGG TTTTCCCCGT ATGGGAGCGC ATCGTGAACT GAAAAAAAAT
CTGGAATCTT ACTGGAAGGG AGCCATCGGG CAGGAAAAAC TCATGGCTTC CGGGCGGGAG
CTTCGCTTAC GGCATTGGCG TTTGCAACAG CAGGCGGGAA TCGATCTTGT GCCGGTCGGA
GATTTCTCTT ATTACGACCA TATGCTCGAT ATGGTCGCTA TGCTCGGTGC GGTGCCGCCG
CGTTTCGGAT GGCAAGGCGA ATCGGTAGAT CTGGATACGT ATTTTTATAT GGCACGCGGG
TCTTCGGGGC ATCGTACAAC GACCGCTATG GAGATGACCA AATGGTTTGA TACCAATTAT
CACTATATTG TTCCGGAGTT TTACCCTGGA CAACGCTTCC GGTTAGCCAG GAATCGTTTG
TTTGAGGAGC TTGCCGAGGC CTGCATTGAA GGTATTCAGG CAAAACCGGT TTTGCCCGGT
CCAATGACAT TTATTGCACT GGGCAAGGAA ATGGTGGCCG GTTTCGATCG TTGGAGTCAC
CTTGATGCGG TGGTTGAAGT CTACGAGGAG ATCGTAAGCC GGGTTGCCGC CAAATGCTCC
TGGATCCAAT TGGACGAACC CATTCTGGCG ACCGATGTGC CGGGACCCAT TCGCTTGCGC
GTGCGAGACG TTTATCGGAG GTTGGCGGCC GTTGCCGGTC CCTGCCGTTT GATGGTGGCC
ACGTACTTTG GCGCCCTGCA GGAAAATCTG GATCTGGCAC TTTCCCTCCC GGTGGATGGG
CTGCATGTCG ATCTTGTGCG CGCCCCCGGA CAACTCGAGA AGGTGTTGCC ATGCCTTCCT
GAAAACATGG TTCTTTCTTT GGGGCTGATT GACGGCCGCA ACGTTTGGAG ATCGAATCTC
AGACAGGCCA TAAGTACAGC GCAGGATGCG GTGGTGGCTC GCGGCTCTGA CCGCGTAATG
ATTGCGCCCT CCTGCTCTTT ACTTCATGTA CCCGTTGATC TGGCGGGGGA GGCCGTCCTG
GATCCCCGTA TCCGATCATG GCTGGCATTT GCCAGACAAA AGTGCCAGGA AGTGAATGTT
GTTCGGCTGG CCCTGGACGG AGAGGATGTG ACAGAGGTTT TGCAGGCGAA TGACACCGCC
ATGGAAAATC GTCGGAAGAG TGCCCTGGTG CATCGTGATG CGGTCCGGCG GCGGATGGCG
GATATCTCTC CAGATATGTA TTGTCGACGT TCATCTTTTG AAGAACGCAA AAAGCAACAG
GCCTGGCTGC GGTTGCCGAC GCTTCCGACC ACCACCATCG GGTCTTTTCC GCAGGTCGCT
GGCGTTCGTT CTGCGCGCCG AAGCTTTAAA CAAGGTCGTA TTAGCGAAGA GCAATACCGC
GCTGAAATGC AACGTTACAT TCGGGAAGCG ATTGCCCAGC AGGAGGCGTT GGGGCTGGAT
GTGCTGGTAC ACGGAGAGCC CGAGCGCAAC GATATGGTGG AGTATTTCGG CGAGCAGCTT
GCGGGGTTCT GCTTCACCGA AAACGGATGG GTGCAGGGCT ATGGCAGCCG TTGCGTTAAA
CCACCGATTA TCTATGGCGA TGTAGAACGT TTGAAGCCTA TGACCATGGA GTGGACAACC
TATGCCCAGC AGCAGACCAA CCGACCTTTA AAAGGCATGC TTACCGGTCC GGTGACCATG
CTTTGCTGGA GCTTCGTCCG AGACGATCAA CCCCGCAGCG CGACCTGTAA GCAGATCGCT
TTGGCGATAC GGGACGAGGT TCAGGATCTG GAGCAGGCGG GTATAAAGAT TATCCAGGTC
GATGAGGCGG CCCTGCGTGA AGGGCTGCCC CTGCGTAAAA GCGCCTGGCG GGAATATCTG
GGCTGGGCAG TGGATGCCTT CCGTCTGACG GCTTCAGGGG TGGCCGATTC CACGCAGATT
CATACGCATA TGTGCTATAG CGAATTCAAC CACATTGCGG AATGGATCGC CAAGATGGAT
GCCGATGTGA TCAGTATCGA GGCAAGCCGC AGTAACATGG AGCTTCTGGG GGTTTTAGAG
TCGTTCACCT ATCCGAACGA TATCGGTCCC GGAGTCTATG ATATTCATAG TCCCAGGGTG
CCTTCGGTTG CGGAAATGGT TGAGTTGCTG CGCAAGGCGT CGGAGGTCAT CCCCCTTGAG
CGTCTGTGGG TAAACCCCGA TTGCGGCCTG AAAACCCGGG CCTGGCCGGA AACCCTGGCG
TCGTTGCGAA ACATGGTGGC GGCTGCGCAA AAGTTGCGGT TTTTTGCCCG GGGATAA
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| Protein sequence | MLTHTLGFPR MGAHRELKKN LESYWKGAIG QEKLMASGRE LRLRHWRLQQ QAGIDLVPVG
DFSYYDHMLD MVAMLGAVPP RFGWQGESVD LDTYFYMARG SSGHRTTTAM EMTKWFDTNY
HYIVPEFYPG QRFRLARNRL FEELAEACIE GIQAKPVLPG PMTFIALGKE MVAGFDRWSH
LDAVVEVYEE IVSRVAAKCS WIQLDEPILA TDVPGPIRLR VRDVYRRLAA VAGPCRLMVA
TYFGALQENL DLALSLPVDG LHVDLVRAPG QLEKVLPCLP ENMVLSLGLI DGRNVWRSNL
RQAISTAQDA VVARGSDRVM IAPSCSLLHV PVDLAGEAVL DPRIRSWLAF ARQKCQEVNV
VRLALDGEDV TEVLQANDTA MENRRKSALV HRDAVRRRMA DISPDMYCRR SSFEERKKQQ
AWLRLPTLPT TTIGSFPQVA GVRSARRSFK QGRISEEQYR AEMQRYIREA IAQQEALGLD
VLVHGEPERN DMVEYFGEQL AGFCFTENGW VQGYGSRCVK PPIIYGDVER LKPMTMEWTT
YAQQQTNRPL KGMLTGPVTM LCWSFVRDDQ PRSATCKQIA LAIRDEVQDL EQAGIKIIQV
DEAALREGLP LRKSAWREYL GWAVDAFRLT ASGVADSTQI HTHMCYSEFN HIAEWIAKMD
ADVISIEASR SNMELLGVLE SFTYPNDIGP GVYDIHSPRV PSVAEMVELL RKASEVIPLE
RLWVNPDCGL KTRAWPETLA SLRNMVAAAQ KLRFFARG
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