Gene Pcar_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0428 
Symbol 
ID3723141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp520393 
End bp521661 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content57% 
IMG OID637750014 
ProductOMPP1/FadL/TodX family toluene transport protein 
Protein accessionYP_355858 
Protein GI77918043 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0000260266 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA GGGTTCTTCC GGGTTTGATC GCCGTGACGT TGATGCTCTT TACGCCGCTG 
ACCGGCTGGG CAACCAACGG CATGAACATG ATCGGAACGG GCGCGGTTTC CGCCGGCATG
GGCGGGGCGG ATGTGGCGGT TCCTGCGGGT TGCACAGCCA TAGCGGGTAA TCCGGCACAG
CTGGCGACAA CATGTAATCG CGTCATTTCC GTAGGCGGCG CGTTGATGTT TCCCGACATG
GAAGACGCAC CTGCCGGCGG AAGCAACGTA GACAACGAAT TTCAGGTCTT TCCGGTGCCA
TTCATCGGTT ACGCCCAACG CCTCGGGACC AGCCGCTGGT CCGCAGGGGT CGGCATCTTC
GCGCAGGGCG GCATGGGTGT CGATTTCAAA GACGTTGAAG TCAATACGGC CTACTACCCG
GGCATGAAGG ACGATCTCAT GTCCGAGGTC GGATTCGTCA GATTTTCACC CACCGTGGCG
TATAACGTCA GCGACAGATT GACCATGGGG GCAAGCTTGT TTGCAGGCTA TGCCACCATC
AAATACGACT TTTTTCCCAA CACCATCGGG CACAAGGTGA AAGACCTGAG CAGCTTCACC
TTCTCCGGTC GCTTCGGCCT CAGCTACCAG ATCAACGACC AATGGTCGGT GGGCGCTACG
TACACATCCG AAAGCTCCAT CGATTTTGAC GACGGCGAAC TCACACAGAA TTTCGGCCCC
ATGGGCAAGG TAAAATACGA TGACGTCAAA ATGGACGGTT TCACCTGGCC GCGACAGGTC
GAAATCGGCG CAGCCTACCG GGCCACTCCC AAACTGCTGC TGGCTCTGGA TCTGAGCTGG
ATCAACTGGA GCTCCGCCAT CAAAACCGTT ACGGTTACGG CCAGCGACCC AAACGGCCCC
GTGCCGCCGG GCTATGAAAA GTTAAAGGTT CCCTTTGAGA TGGACTGGGA CGACCAATTC
GTGGTGGCCA TCGGAGCGGA GTACGAATTG ACCGAATCCT TCACCGTCCG CGCCGGTTAC
AACTACGGCA ACACTCCGGT CACCAATGTC AATCTGAGCC CGATCTTCCC GGCCCTTGTC
GAACACCACG CCACTGTGGG ATGTACCTAC ACCTGGAAGC AGTGGGACTT CGATTTCGCT
TATGAGCACG CCTTTACCAA CACCGAAACC AACGACGGGG ACGCCAACCC GATGACGAAT
CCGTTCTACG GTTCCGAAGT GTCCCATACC ATGGATACCT TCAGTTTTAT GGTAAGCTAC
CGTTTCTAA
 
Protein sequence
MKKRVLPGLI AVTLMLFTPL TGWATNGMNM IGTGAVSAGM GGADVAVPAG CTAIAGNPAQ 
LATTCNRVIS VGGALMFPDM EDAPAGGSNV DNEFQVFPVP FIGYAQRLGT SRWSAGVGIF
AQGGMGVDFK DVEVNTAYYP GMKDDLMSEV GFVRFSPTVA YNVSDRLTMG ASLFAGYATI
KYDFFPNTIG HKVKDLSSFT FSGRFGLSYQ INDQWSVGAT YTSESSIDFD DGELTQNFGP
MGKVKYDDVK MDGFTWPRQV EIGAAYRATP KLLLALDLSW INWSSAIKTV TVTASDPNGP
VPPGYEKLKV PFEMDWDDQF VVAIGAEYEL TESFTVRAGY NYGNTPVTNV NLSPIFPALV
EHHATVGCTY TWKQWDFDFA YEHAFTNTET NDGDANPMTN PFYGSEVSHT MDTFSFMVSY
RF