Gene Pcar_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0423 
Symbol 
ID3723078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp516622 
End bp517086 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content55% 
IMG OID637750009 
Producttranscriptional regulator 
Protein accessionYP_355853 
Protein GI77918038 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.0961866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCATAA CCAGAGCAAC CGAATACGCC ATACGCGCCG TATTATTCAT GGCCACCCAG 
CCACGCGGCG AAACCGTTTT AAAGAAAGAC ATCTGCCGGG AGCAGGAAAT CACGCCCGCC 
TTTCTTACCA AGATCCTCCA ACCCCTCATC AAGCAGGGTA TCGTTGGATC CCATCGTGGT 
ATCGGCGGGG GATTTTATCT GGCCAAGGAT CCTGCCGACA TAACCCTGCT CGATGTCATT 
AAAGCCGAGG AAGGCCCCAT ATATCTCAAC CTCTGCCTGG CAGAAGAAAC CAATTGCAAC 
CGGGAACCTA CGTGTCCGGT CAACCGGGTC TGGCGCGAAG CACGCACGCA GTTGCTGGCG 
GTTCTGGATC GCTACAGCTT TGCAGACCTC TGCCGCATGG GTGCGGAAGC ACAAAATGCC 
ATTATCTGCG GTGCCACTGA ACAGAAAGAT TCTTCGTCCC GGTAG
 
Protein sequence
MIITRATEYA IRAVLFMATQ PRGETVLKKD ICREQEITPA FLTKILQPLI KQGIVGSHRG 
IGGGFYLAKD PADITLLDVI KAEEGPIYLN LCLAEETNCN REPTCPVNRV WREARTQLLA 
VLDRYSFADL CRMGAEAQNA IICGATEQKD SSSR