Gene Pcar_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0416 
Symbolald 
ID3723070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp507828 
End bp509000 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content59% 
IMG OID637750001 
Productalanine dehydrogenase 
Protein accessionYP_355846 
Protein GI77918031 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0686] Alanine dehydrogenase 
TIGRFAM ID[TIGR00518] alanine dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.533057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTATGG GGCCGGTGCT TGCCACCGGC CCTTTTGAAA ACAACCTTCT GGCTGTTGGA 
TGGATTATGA TTATCGGAGT TCCCAAAGAG ATCAAAACCC GCGAATACCG GGTCGCCATG
ACACCGGCAG GGGTACGTGC CCTTACCGAA GACGGCCACA CCGTACTGGT GGAGCGCGAA
GCCGGGATCG GCAGTGGTCT GAGCGATGAA CAATATCGCC AGGCAGGGGC CCGTCTGGTG
GATGCACCGG ACAGTGTCTA CGCAGAAGCG GAGCTCGTTG TTAAAGTCAA GGAACCGCTG
CCCGCCGAAT ACGATTTACT GCATGCCAAC CAACAGCTAT TCACCTTTTT ACACCTGGCG
GCCGCTCCTG ACTTGACGGT CTCCCTGCTC AATAACCGGG TCACTGCAAT CGCCTATGAA
ACCATCCAAC TGGCGGATGG CAGTCTGCCC CTGCTGCAAC CGATGAGCGA AGTTGCCGGA
CGCATGGCCG TGCAGATCGG CGCACATTTT CTACAAAAGG AATGTGGCGG CAAAGGAGTG
CTGTTGGCGG GAGCACCGGG CGTACGTCCC GGCCGGGTGG TGGTACTGGG CGCCGGCACC
GGCGGCAGTA ACGCCGTGCG CATTGCTGTG GGCATGGGCG CCGACGTCAC CGTATTCGAC
ATCGAACCGA CCCGCCTGGC AGCGCTTGAC GATCATTACG GCAACCATAT CCACACCCTG
ATGTCCAATA CCCAGAATAT CGAGGAGGAA GTCAGTCGGG CGGATCTGGT CGTCGGGGCC
GTCTTGATTC CGGGGGCCCG GGCACCGCAC CTGGTATCGG AGGAAATGGT AAAAAGGATG
GAGCCCGGCA GCGTGATCGT CGACCTGGCC GTCGATCAGG GCGGCTGCAT CGAAACGGTA
CGTCCCACAA CGCATGATGA CCCGATACAC GAAAGGTTCG GGATTTTACA CTACGGCGTG
GCCAACATGC CCGGAGCGGT CAGCCGCACC AGCACCTTCG CCCTGACCAA CAGCACCCTG
GTATATATCC GAAAAATCGC CAATCAGGGA CTGCAAAGCG CCATGAGCGA AGATCCCTCC
CTGGCCAAGG GACTCAACAC CCACCAGGGG CGGTTGCATA ACAGGGCTGT CGCCGAAGCG
CTGGAACTGC CTTTTACGCC TTTGCCTTTC TGA
 
Protein sequence
MPMGPVLATG PFENNLLAVG WIMIIGVPKE IKTREYRVAM TPAGVRALTE DGHTVLVERE 
AGIGSGLSDE QYRQAGARLV DAPDSVYAEA ELVVKVKEPL PAEYDLLHAN QQLFTFLHLA
AAPDLTVSLL NNRVTAIAYE TIQLADGSLP LLQPMSEVAG RMAVQIGAHF LQKECGGKGV
LLAGAPGVRP GRVVVLGAGT GGSNAVRIAV GMGADVTVFD IEPTRLAALD DHYGNHIHTL
MSNTQNIEEE VSRADLVVGA VLIPGARAPH LVSEEMVKRM EPGSVIVDLA VDQGGCIETV
RPTTHDDPIH ERFGILHYGV ANMPGAVSRT STFALTNSTL VYIRKIANQG LQSAMSEDPS
LAKGLNTHQG RLHNRAVAEA LELPFTPLPF