Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0410 |
Symbol | |
ID | 3723199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 502139 |
End bp | 502807 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637749995 |
Product | hypothetical protein |
Protein accession | YP_355840 |
Protein GI | 77918025 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000000000196847 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACGTT TTTACCTTTT TTTCGTCCTT TCCAGCCTCC TGCTTTCAGG ATGTGCCATG ACCTCACCCG GCACCCGCCC CGGCACCGCC CCGGGAGGGA CGGCCCTTAG ATCGACGATC GAGGCCCAGC GCCAGGAGAT TGAGCAATTG AGCATGCGGC TGGACACCCT TGAACAAAAT CTGGCCGGGC AGCAAAAGCA GCTGGCAGCG CTACAGGCAG CTGCGGCGGC ACAAAAAGTC ACCTACACCG GGGAAAACAC CATCTCTGCG GGACATACCA CGGGCACCGG AGCCGATCAG ACTCCCGCCT CTGCAACCAA AATCTACCTG AAGGCATTCG GCGATTACGC TTCCGGCCGT TATCACCAAG GCATAAAAGG CTTTGAAAGC TTTTTGGATC ATTTCCCAGC CAACAATTAT GCCGGCAATG CTCAATTTTG GCTCGGAGAA TGCTACTACA ACCTGGGACA ATACGATCGC GCCGTCCAGG AGTTTCAAAA AGTTGTCGAT AATTACCCGC TCAGCGGCAA AGCACCGGAG GCCCTGCTGC GCATGGCACC GGCCTTGCGC CAGCTTAATC AGTATGAAAA GGCACGCCAG GCCCTGCAGG CGCTGCAACA GCGTTACCCA AACAGCGCTG CAGCGCGCAA AGCCATGATC GAGCCCTGA
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Protein sequence | MTRFYLFFVL SSLLLSGCAM TSPGTRPGTA PGGTALRSTI EAQRQEIEQL SMRLDTLEQN LAGQQKQLAA LQAAAAAQKV TYTGENTISA GHTTGTGADQ TPASATKIYL KAFGDYASGR YHQGIKGFES FLDHFPANNY AGNAQFWLGE CYYNLGQYDR AVQEFQKVVD NYPLSGKAPE ALLRMAPALR QLNQYEKARQ ALQALQQRYP NSAAARKAMI EP
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