Gene Pcar_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0410 
Symbol 
ID3723199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp502139 
End bp502807 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content57% 
IMG OID637749995 
Producthypothetical protein 
Protein accessionYP_355840 
Protein GI77918025 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000000000196847 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGTT TTTACCTTTT TTTCGTCCTT TCCAGCCTCC TGCTTTCAGG ATGTGCCATG 
ACCTCACCCG GCACCCGCCC CGGCACCGCC CCGGGAGGGA CGGCCCTTAG ATCGACGATC 
GAGGCCCAGC GCCAGGAGAT TGAGCAATTG AGCATGCGGC TGGACACCCT TGAACAAAAT 
CTGGCCGGGC AGCAAAAGCA GCTGGCAGCG CTACAGGCAG CTGCGGCGGC ACAAAAAGTC 
ACCTACACCG GGGAAAACAC CATCTCTGCG GGACATACCA CGGGCACCGG AGCCGATCAG 
ACTCCCGCCT CTGCAACCAA AATCTACCTG AAGGCATTCG GCGATTACGC TTCCGGCCGT 
TATCACCAAG GCATAAAAGG CTTTGAAAGC TTTTTGGATC ATTTCCCAGC CAACAATTAT 
GCCGGCAATG CTCAATTTTG GCTCGGAGAA TGCTACTACA ACCTGGGACA ATACGATCGC 
GCCGTCCAGG AGTTTCAAAA AGTTGTCGAT AATTACCCGC TCAGCGGCAA AGCACCGGAG 
GCCCTGCTGC GCATGGCACC GGCCTTGCGC CAGCTTAATC AGTATGAAAA GGCACGCCAG 
GCCCTGCAGG CGCTGCAACA GCGTTACCCA AACAGCGCTG CAGCGCGCAA AGCCATGATC 
GAGCCCTGA
 
Protein sequence
MTRFYLFFVL SSLLLSGCAM TSPGTRPGTA PGGTALRSTI EAQRQEIEQL SMRLDTLEQN 
LAGQQKQLAA LQAAAAAQKV TYTGENTISA GHTTGTGADQ TPASATKIYL KAFGDYASGR 
YHQGIKGFES FLDHFPANNY AGNAQFWLGE CYYNLGQYDR AVQEFQKVVD NYPLSGKAPE 
ALLRMAPALR QLNQYEKARQ ALQALQQRYP NSAAARKAMI EP