| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0405 |
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| Symbol | gid |
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| ID | 3723194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 495259 |
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| End bp | 496638 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637749990 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_355835 |
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| Protein GI | 77918020 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCTA CACACAGCCA ACAGCCCCAT CTGACCATCA TCGGCGCCGG CCTGGCCGGA
TGCGAAGCGG CATGGCAAGC TGCCGCCCTT GGGGTGCAGG TGACCCTGCA TGAAATGAAA
CCCACCAGTT TCTCCCCGGC GCACCAAAGT GCGGACCTGG CCGAACTGGT CTGTTCCAAC
AGTTTGCGCG GAGCCGGCAT GAACAATGCC GTCGGTTGCC TAAAAGAAGA ATTGCGCCGC
TGTGCGACGC TGTTCATGCA GGCCGCCGAT GCTACCGCCG TCCCTGCCGG GGGCGCGCTG
GCGGTCGATC GCGACGCTTT CTCCCGCTAT ATTACCGAGC ACATCGAACA GCATCCCCTT
ATCACCCTGC AACGCAACGA ACAATGCTCG GTTCCCCCCG AAGGCACGGT CATTATTGCC
TCGGGCCCGC TCACCTCCGA CGCGCTGGCA CCCCATCTGG CGCAGCTGAC CGGCAGCCGG
CACCTGTACT TTTACGATGC CATCGCCCCT ATCATCGAAG CGGACAGCAT CGACTTCAGC
ATCGCCTGGA AAGCCTCGCG TTATGGGCGC GGCGGAGACG ACTATATCAA CTGCCCGATG
TCCCGCGACG AATACATGAC CTTTGTCGAA GCCCTCAAAA CCGCCGACAA GGTGGCGGGC
AAGGACTTTG AAAAAGTTAT TCATTTCGAG GGCTGCATGC CCATCGAGGA AATGGCCCGA
CGCGGCGACA TGACGCTGGC CTTCGGCCCC ATGAAGCCGG TCGGCCTGCC CGATCCGCGC
ACCGGTAAAG ATCCTTTCGC CGTCGTCCAG CTACGCCAGG ACAACCTGCA TGCAACCCTG
TTTAACATGG TCGGCTTCCA GACCAAGCTC ACCTATCCGG AACAGCGGCG TATCTTCCGC
ACCATTCCGG GACTGCAAGA CGCCCGGTTC GCACGTCTGG GCAGCATGCA CCGCAACACC
TTCATCAACG CTCCGCGTTG CCTGGATCAG CACCTGCGCC TCACATCCGA TCCGCGCATG
TTTTTCGCCG GCCAGATCAC CGGCGTGGAA GGGTACGTCG AATCGGCGGC CTGCGGCTTT
CTGGCCGGCC TGTTCGCAGC CGGCCAGTTG ACCGACCATG CCGTGCCGCT GCCACCGGCG
ACCACCGGTC TCGGCGCATT GCTCGGTCAT TTGTCGCACT CCAGTCCCGA CGACTTTCAG
CCGATGAATG TCAATTACGG CCTGTTCCCT CCCCTGGAGG GGCGCAAACG CAAACGATCC
GAACGCCGCC TGGCCATGGC AGAGCGGGCC CTGCGGGATC TGGAACCCTG GCGCCAGCGG
GTACTCTCCC ATATACCTGA TCTCAAGCCT TTTCCCGCGG AGGACTCCGA TGATGTCTGA
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| Protein sequence | MNPTHSQQPH LTIIGAGLAG CEAAWQAAAL GVQVTLHEMK PTSFSPAHQS ADLAELVCSN
SLRGAGMNNA VGCLKEELRR CATLFMQAAD ATAVPAGGAL AVDRDAFSRY ITEHIEQHPL
ITLQRNEQCS VPPEGTVIIA SGPLTSDALA PHLAQLTGSR HLYFYDAIAP IIEADSIDFS
IAWKASRYGR GGDDYINCPM SRDEYMTFVE ALKTADKVAG KDFEKVIHFE GCMPIEEMAR
RGDMTLAFGP MKPVGLPDPR TGKDPFAVVQ LRQDNLHATL FNMVGFQTKL TYPEQRRIFR
TIPGLQDARF ARLGSMHRNT FINAPRCLDQ HLRLTSDPRM FFAGQITGVE GYVESAACGF
LAGLFAAGQL TDHAVPLPPA TTGLGALLGH LSHSSPDDFQ PMNVNYGLFP PLEGRKRKRS
ERRLAMAERA LRDLEPWRQR VLSHIPDLKP FPAEDSDDV
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