Gene Pcar_0368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0368 
SymbolrhlE 
ID3723290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp457280 
End bp458587 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content59% 
IMG OID637749952 
Productputative ATP-dependent RNA helicase 
Protein accessionYP_355798 
Protein GI77917983 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00019163 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTT CAGAATTAAA GCTCGACCCT CGTATTCTCA AAGCTCTGAC CGATTGCGGT 
TATCATGTTC CGACCCCCAT TCAGGCGCAG GCCGTGCCCG AGGCTCTGGC GGGGCGGGAT
CTGATCGCCA GCGCCGGAAC CGGTACGGGT AAAACCGCCG CTTTCATGCT GCCTGCTTTG
CAGCGCTTGA CGGTAAAGAT TGCCCGTCGC AAGGGGGCGC CCAGGATGCT GGTGCTGGCG
CCGACCCGCG AACTGGCGGG GCAGGTTATG GACGCAGCGC GTGTTTACGG CAAATATCTC
GGTCTGACAA CGGCCGTGTT GCTTGGCGGG GTGCCTTACC GGGACCAGTT CCGGGCCTTG
GCTAAACCCC TTGATCTGGT TGTGGCGACC CCCGGACGTC TGCTCGATCA TTTGCAGCGG
CGCAGTATCG ACCTGTCCTG TCTGGAGATG CTGGTTCTGG ACGAGGCCGA TCGCATGCTC
GATATGGGCT TCAAGGAGGA TGTTGACAAG GTTTGTGCCG CGGCACCCCG ACAGCGCCAG
ACCATGATGT TTACCGCTAC CTTGAATGAT GCCATGCAGA AAATGGCCCG GCGGTTGCTC
GACGATCCAT TCCGCATCGA TATCGCTGTG GTTAAGAATG TCTCGGATCA CATTGAGCAG
CATTTGCATG TGGCGGACAA TCGCCAGCAC AAGAACAGGC TCCTGCAACA TTTGCTGAAA
CATTCGGATA TTTCGCAGGC CATTGTTTTT TCCGCGACCA AGCGCGATGC CGATAGCCTG
GCCAGAGATC TGTCCGCGCA GGGGTATCGG GCTGCCGCTT TGCATGGCGA CATGAACCAG
GGGGCGCGGA ATCGGACCGT ACGCGATTTG CGGCGCGGAC GCATTCGTGT GCTGGTGGCT
ACCGATGTTG CTGCCCGAGG TTTGGATGTC GCCGGTATCA GTCACGTATT CAACTACGAT
TTGCCCAAGT TTGCGGAAGA CTATGTGCAC CGCATCGGTC GTACCGGACG GGCCGGAGCC
ACGGGGGTGG CGATATCCTT TGTGTCCGGT GCGGAGGTCA GTGCCTTGCG ACGTATTCAA
CACTTTATCG GCCGCGAATT GCCGCGTCGG GAAATTCCCG GTCTGGAACC CCGTTTCCCT
TTGAGGGCAG CATCCGCTGA GGGACGGCGG CGCTATAAAG GGAATGGACC GAACCGTTCG
GGCAGGAAGC CGGCCAGCTA TTTTTCCGGA CGTAAAGAGC GCCAAGGCGG TTGTTCCGAG
AGGTCGCGCG GGCAATCGGC GGCTCGAGAG CGCCTGGGGA CGGTGTAG
 
Protein sequence
MDFSELKLDP RILKALTDCG YHVPTPIQAQ AVPEALAGRD LIASAGTGTG KTAAFMLPAL 
QRLTVKIARR KGAPRMLVLA PTRELAGQVM DAARVYGKYL GLTTAVLLGG VPYRDQFRAL
AKPLDLVVAT PGRLLDHLQR RSIDLSCLEM LVLDEADRML DMGFKEDVDK VCAAAPRQRQ
TMMFTATLND AMQKMARRLL DDPFRIDIAV VKNVSDHIEQ HLHVADNRQH KNRLLQHLLK
HSDISQAIVF SATKRDADSL ARDLSAQGYR AAALHGDMNQ GARNRTVRDL RRGRIRVLVA
TDVAARGLDV AGISHVFNYD LPKFAEDYVH RIGRTGRAGA TGVAISFVSG AEVSALRRIQ
HFIGRELPRR EIPGLEPRFP LRAASAEGRR RYKGNGPNRS GRKPASYFSG RKERQGGCSE
RSRGQSAARE RLGTV