Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0368 |
Symbol | rhlE |
ID | 3723290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 457280 |
End bp | 458587 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637749952 |
Product | putative ATP-dependent RNA helicase |
Protein accession | YP_355798 |
Protein GI | 77917983 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00019163 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTTT CAGAATTAAA GCTCGACCCT CGTATTCTCA AAGCTCTGAC CGATTGCGGT TATCATGTTC CGACCCCCAT TCAGGCGCAG GCCGTGCCCG AGGCTCTGGC GGGGCGGGAT CTGATCGCCA GCGCCGGAAC CGGTACGGGT AAAACCGCCG CTTTCATGCT GCCTGCTTTG CAGCGCTTGA CGGTAAAGAT TGCCCGTCGC AAGGGGGCGC CCAGGATGCT GGTGCTGGCG CCGACCCGCG AACTGGCGGG GCAGGTTATG GACGCAGCGC GTGTTTACGG CAAATATCTC GGTCTGACAA CGGCCGTGTT GCTTGGCGGG GTGCCTTACC GGGACCAGTT CCGGGCCTTG GCTAAACCCC TTGATCTGGT TGTGGCGACC CCCGGACGTC TGCTCGATCA TTTGCAGCGG CGCAGTATCG ACCTGTCCTG TCTGGAGATG CTGGTTCTGG ACGAGGCCGA TCGCATGCTC GATATGGGCT TCAAGGAGGA TGTTGACAAG GTTTGTGCCG CGGCACCCCG ACAGCGCCAG ACCATGATGT TTACCGCTAC CTTGAATGAT GCCATGCAGA AAATGGCCCG GCGGTTGCTC GACGATCCAT TCCGCATCGA TATCGCTGTG GTTAAGAATG TCTCGGATCA CATTGAGCAG CATTTGCATG TGGCGGACAA TCGCCAGCAC AAGAACAGGC TCCTGCAACA TTTGCTGAAA CATTCGGATA TTTCGCAGGC CATTGTTTTT TCCGCGACCA AGCGCGATGC CGATAGCCTG GCCAGAGATC TGTCCGCGCA GGGGTATCGG GCTGCCGCTT TGCATGGCGA CATGAACCAG GGGGCGCGGA ATCGGACCGT ACGCGATTTG CGGCGCGGAC GCATTCGTGT GCTGGTGGCT ACCGATGTTG CTGCCCGAGG TTTGGATGTC GCCGGTATCA GTCACGTATT CAACTACGAT TTGCCCAAGT TTGCGGAAGA CTATGTGCAC CGCATCGGTC GTACCGGACG GGCCGGAGCC ACGGGGGTGG CGATATCCTT TGTGTCCGGT GCGGAGGTCA GTGCCTTGCG ACGTATTCAA CACTTTATCG GCCGCGAATT GCCGCGTCGG GAAATTCCCG GTCTGGAACC CCGTTTCCCT TTGAGGGCAG CATCCGCTGA GGGACGGCGG CGCTATAAAG GGAATGGACC GAACCGTTCG GGCAGGAAGC CGGCCAGCTA TTTTTCCGGA CGTAAAGAGC GCCAAGGCGG TTGTTCCGAG AGGTCGCGCG GGCAATCGGC GGCTCGAGAG CGCCTGGGGA CGGTGTAG
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Protein sequence | MDFSELKLDP RILKALTDCG YHVPTPIQAQ AVPEALAGRD LIASAGTGTG KTAAFMLPAL QRLTVKIARR KGAPRMLVLA PTRELAGQVM DAARVYGKYL GLTTAVLLGG VPYRDQFRAL AKPLDLVVAT PGRLLDHLQR RSIDLSCLEM LVLDEADRML DMGFKEDVDK VCAAAPRQRQ TMMFTATLND AMQKMARRLL DDPFRIDIAV VKNVSDHIEQ HLHVADNRQH KNRLLQHLLK HSDISQAIVF SATKRDADSL ARDLSAQGYR AAALHGDMNQ GARNRTVRDL RRGRIRVLVA TDVAARGLDV AGISHVFNYD LPKFAEDYVH RIGRTGRAGA TGVAISFVSG AEVSALRRIQ HFIGRELPRR EIPGLEPRFP LRAASAEGRR RYKGNGPNRS GRKPASYFSG RKERQGGCSE RSRGQSAARE RLGTV
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