Gene Pcar_0350 details

Gene Information

• Locus tag: Pcar_0350
• Symbol: lipB
• ID: 3723483
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 437063
• End bp: 437698
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637749934
• Product: lipoate-protein ligase B
• Protein accession: YP_355780
• Protein GI: 77917965
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0321] Lipoate-protein ligase B
• TIGRFAM ID: [TIGR00214] lipoate-protein ligase B

Plasmid Coverage information

• Num covering plasmid clones: 77
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATAA AAGATCTTGG CGTTATGCCT TATGCCGAGG CATATGCTTT ACAGGAACAA 
TTGGTCCGGG ATATTGCAGC CGGCTCCGCC CCGGAAACCC TGCTGCTGGT GGAACATCCG 
CCTGTTTATA CCCTGGGGCG CAGCGGTCAC ATGGAAAACC TGCTGGATGA CAGCATCGAG 
GTGGTCAGCA TCAATCGCGG CGGCGACATT ACCTACCATG CTCCCGGCCA GTTGGTCGGG 
TACCCCTTGT TGAATCTCGG TCTTCGCGGC AGGGATCTGC GTCATTATCT GCGTTTTCTC 
GAAGAGGTAC TCATCGCCGC CGCCGCCGAT ACGGGGGTGG AAGGTTTTCG TCGCGAGGGT 
AAAACCGGCG TCTGGACCGA ACAAGGCAAG CTGGCCTCCA TTGGCGCTGG GGCGCGACGC 
TGGGTAACCA TGCACGGATT CGCCCTGAAT GTTTGCCTGG ATCTGTCAGG TTTCTCTCGT 
ATCCATCCGT GCGGGATCGT CGGTTGTACC ATGACCTCCC TGCAGCAGAT AACCGGACAG 
CCGGTTTCCA TGGCTCAGGT CAAAGCTCGG GTGGTTTATC ATTTTCAATC CTTGCTGAAG 
ACCTGGCTGC CACTGGCCCA GGTTGCGACC CTTTGA 

 

Protein sequence

MEIKDLGVMP YAEAYALQEQ LVRDIAAGSA PETLLLVEHP PVYTLGRSGH MENLLDDSIE 
VVSINRGGDI TYHAPGQLVG YPLLNLGLRG RDLRHYLRFL EEVLIAAAAD TGVEGFRREG 
KTGVWTEQGK LASIGAGARR WVTMHGFALN VCLDLSGFSR IHPCGIVGCT MTSLQQITGQ 
PVSMAQVKAR VVYHFQSLLK TWLPLAQVAT L