Gene Pcar_0342 details

Gene Information

• Locus tag: Pcar_0342
• Symbol: thiE-1
• ID: 3723475
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 427410
• End bp: 428030
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637749926
• Product: thiamine monophosphate synthase
• Protein accession: YP_355772
• Protein GI: 77917957
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 79
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCGGG AAGATATCTG CGGCGTTTAT CTGATTACCG AATCTGTGCC TGATATGCTG 
GAAAGGGTGC GTATTGCCCT GGCAAACGGT GTGAAGGTGG TGCAGTACCG CGGTAAAAAC 
GATCCCGAAG CAAAGCGCCT GCCCATGGCC AACCGGTTGC GTTGCTTGTG CGGAGAGTAC 
GGGGCGTTTT TTATCGTCAA CGATGATCCT GGCCTGGCGC TGGCCTGCCG GGCTGACGGC 
GTACATTTGG GCCAAGGCGA TGGTTCGGTG ATGCAGGCCA GGCAAATGCT GGGCGAAGCG 
GCCCTTATCG GCGTCTCGAC CCACTCTCTT TCCGAAGCTG AACAGGCCCA GCGGCAGGGT 
GCCGATTATA TCGGTTTCGG CTGTCTTTTC GCGACTGCAT CGAAGCGGGA TACGGTGTCC 
GCGTCGCTGG ATGAATTGCG GCTTGTAAGG CATGTCGTGT CGTTGCCGAT TGTAGCGATC 
GGCGGCATCC ATATTGGTAA TGCTGCGCTG GCTGTTCAGG CCGGAGCGGA TGCCGTGGCC 
GTCATTTCGG CCGTGATGCA GGCCGATGAT TGCAAATCTA CCGTGTGTGA ACTGGACCGT 
CAGTGCCGCG CCCTCATTTA A 

 

Protein sequence

MTREDICGVY LITESVPDML ERVRIALANG VKVVQYRGKN DPEAKRLPMA NRLRCLCGEY 
GAFFIVNDDP GLALACRADG VHLGQGDGSV MQARQMLGEA ALIGVSTHSL SEAEQAQRQG 
ADYIGFGCLF ATASKRDTVS ASLDELRLVR HVVSLPIVAI GGIHIGNAAL AVQAGADAVA 
VISAVMQADD CKSTVCELDR QCRALI