Gene Pcar_0340 details

Gene Information

• Locus tag: Pcar_0340
• Symbol: thiH
• ID: 3723473
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 425109
• End bp: 426233
• Gene Length: 1125 bp
• Protein Length: 374 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637749924
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_355770
• Protein GI: 77917955
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 66
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATTTTC TCGACGAATT CAACAGCTAC GATCGCGGCG AGCTTGCGCA ACGGATTATG 
TCATGCCGGG CTGCCGATGT GGAACGAGCG CTGACGGCGG AACATCTGCG CAGTGCCGAT 
TTTATGGCGC TGCTGTCGCC GGCGGCGCAC GGTTACCTGG AGTCGATGGC ACAAAAAGCC 
CACCGTCTGA CGCAGCAGCG TTTCGGCAAA ACCATCCAGC TCTTTGCGCC GCTGTACATC 
TCCAACGAAT GCAGCAACGG CTGCCTGTAC TGCGGCTTCA ACGCCGCCAA CAAGGTCGCG 
CGGCGCACCT TGAGCCTGGA CGAAGTCGAA GCCGAGGCCC GCATCCTGCG CCAGCGCGGT 
TTCCGTCATG TGCAGATTCT TACCGGTGAA GCTCCCCGGG CTGTGGATAA CGATATGCTG 
GCAGCGGTGG TCCGCCGGAT TCGGCCATTG TTTTCCGCCA TCAGCATCGA AGTCTATCCC 
ATGGAAGAAG CCGGCTACCG ACAGATGGTC GATGCCGGCG TCGACAACCT GACCGTTTAT 
CAGGAGACGT ACGATCGCGA TCTGTACGAC AAGCTGCATC CCTTCGGTCG TAAAAAGGAT 
TTTGACTGGC GTCTGACCAC TCCCGACCGC GGCGGTGCGG CGGGACTGCG TTCCATCGGT 
ATCGGTGCCT TGTTGGGGCT GAGCGACTGG CGCGTCGAAG GTGTGCTGGT CGGGTTGCAC 
GCGCGACACC TGGCGCGTAC CTGGTGGCGC AGTCGGGTGA ATGTATCCTT TCCGCGCATG 
CGGCCCGCCG GGGGCGGGTT CAATCCGCTG GCGCCGGTAT CCGACAGTGC CCTGGTGCAA 
CTGATCTGCG CGCTGCGACT GTTGATACCC GATGCCGGGC TGGTGCTGTC GACCCGCGAA 
AGCTCCAGTT TGCGCGATCA TCTGCTGCCT TTGGGTATCA CCCAGCTGAG TGCCGGCTCC 
TGTACTGCCC CGGGCGGGTA TGGCGACGAG GGGCACGGTA GCGAGCAGTT TGCCATTGAC 
GACGACCGCG ACGCCGAACA GGTTTGCGCC ATGCTGCGCG CCCAGGGATA TGAGCCGGTA 
TGGAAGGATT GGGATCGCAC CTTTATGGAT CGGCAGGCCG TTTGA 

 

Protein sequence

MNFLDEFNSY DRGELAQRIM SCRAADVERA LTAEHLRSAD FMALLSPAAH GYLESMAQKA 
HRLTQQRFGK TIQLFAPLYI SNECSNGCLY CGFNAANKVA RRTLSLDEVE AEARILRQRG 
FRHVQILTGE APRAVDNDML AAVVRRIRPL FSAISIEVYP MEEAGYRQMV DAGVDNLTVY 
QETYDRDLYD KLHPFGRKKD FDWRLTTPDR GGAAGLRSIG IGALLGLSDW RVEGVLVGLH 
ARHLARTWWR SRVNVSFPRM RPAGGGFNPL APVSDSALVQ LICALRLLIP DAGLVLSTRE 
SSSLRDHLLP LGITQLSAGS CTAPGGYGDE GHGSEQFAID DDRDAEQVCA MLRAQGYEPV 
WKDWDRTFMD RQAV