| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0323 |
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| Symbol | rnd |
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| ID | 3725910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 404724 |
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| End bp | 405851 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637749903 |
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| Product | RNase D |
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| Protein accession | YP_355753 |
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| Protein GI | 77917938 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 4.85777e-17 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTTTGC CCCCCATACT GGTCGACGAC GTATCCATAG CCCGATTGGC GCAGGAGTTG
CGCGATGAGG CCGTCATCGC CGTCGATCTC GAAGCCGATT CCCTGCATTC CTATCAGGAA
AAGGTCTGTC TGCTGCAGAT ATCCACTTCG ACCCGAACGG TTCTGGTCGA CCCGCTGGCC
GTGGAGGACC TGGCCGCTCT GGCACCGGTA TTGGCCGACC CGACTATTCG CAAGATTTTT
CATGCCGCTG ATTACGACAT CCGTTGCCTG TTTCGGGATT TCAGGATAGA GGTCCAAGGT
TTGTTCGATA CCATGATCGC CTGCCAGATG CTCGGTGAAA AGCGTGTCGG TCTGGCCGAC
GTGCTGGCCA AATATCTGGA TGTCGAACTC GATAAGCGTT ACCAGCGGGC CGACTGGTCG
AAACGTCCGC TGGAGGAGGG CATGATCCTT TACGCCATGG AGGATACCTG CCATCTGCAT
CGGCTGACGG AGATCCTCGA GGGGCGCCTG CGGGACATGG GACGTTTGAG CTGGGCCGAG
GAGGAATTCG CGTTGCTCCA GAAGGTGCGC CATTCGGAAA ATAACGGTCC GCTGTTTATG
CGCGTGAAAG GCGCCGGCTT GTTGGAACGC AAGCAACTGG CAGTGCTTGA ACAATTGTTG
CAATGGCGTG ATGAGGAAGC ATGCCGCCGG GATCGCCCTG CCTTCAAGGT CGTTGGCAAC
AAAACCTTGC TCGGTTTGGC GCAAATCATG CCCGGCAGCC TTCGGGAAGC GAAGGGCATA
GAGGGCTTTT CGCCGCGGCT GGCCGATCGT TATGGTCGGG CCTTGATCGG GGTGGTGTGC
AAAGCCGCAG CCATTCCCAG AGAGGAGTGG CCGGTCTATC CGCGCGGCGA ACGCCGTGAG
CGGGATCCCG CCGTTGAGGG ACGCATGAAG GATCTCAAGC AGGTGCGTGC GGCCATGGCG
GAAGAACTCG ATATGGATCC CGGTATCCTG GTCAATAATG CGCAACTCGA AGGGGTGGCC
AGGGCCTGTC CGGCCGACAT GGATCAATTA ACGGAACTCG GCATATTGAA GAACTGGCAG
CGGGAAGTGC TTGGTGAGGG CTTGCTGGGC GCATTAAACC GTGGTTGA
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| Protein sequence | MSLPPILVDD VSIARLAQEL RDEAVIAVDL EADSLHSYQE KVCLLQISTS TRTVLVDPLA
VEDLAALAPV LADPTIRKIF HAADYDIRCL FRDFRIEVQG LFDTMIACQM LGEKRVGLAD
VLAKYLDVEL DKRYQRADWS KRPLEEGMIL YAMEDTCHLH RLTEILEGRL RDMGRLSWAE
EEFALLQKVR HSENNGPLFM RVKGAGLLER KQLAVLEQLL QWRDEEACRR DRPAFKVVGN
KTLLGLAQIM PGSLREAKGI EGFSPRLADR YGRALIGVVC KAAAIPREEW PVYPRGERRE
RDPAVEGRMK DLKQVRAAMA EELDMDPGIL VNNAQLEGVA RACPADMDQL TELGILKNWQ
REVLGEGLLG ALNRG
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