Gene Pcar_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0320 
Symbol 
ID3725907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp401145 
End bp402212 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content62% 
IMG OID637749900 
Producthypothetical protein 
Protein accessionYP_355750 
Protein GI77917935 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 
TIGRFAM ID[TIGR00423] radical SAM domain protein, CofH subfamily 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00000157308 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAACG TCATAGCTGA GAAACTCGAG GGCGGCCAGG CTCTCAACCG CAAGGACGCT 
CTTTACTTGT TGCAGCAGGC CGATCTGCTG GCCCTGGGAA GAATGGCCGA TGGTGTGCGC
CGCCGTTTGC ACCCGCAGGG CCGGGTGACC TTCGTGGTCG ATCGTAACGT CAACTATACC
AATGTCTGCC GGACCGGCTG CCGTTTCTGT GCTTTTTACC GGCAACTGGA TGATTCGGAC
GCCTACCTGC TGTCCCACGC GCAGATCCTC GACAAGGTTG CCGAGCTTGC GGCCTGCGGC
GGGACCCAGT TGTTGTTGCA GGGCGGACTG CATCCCGAGT TGCGCATCGC GTGGTTCGAA
GAGTTGTTTC GCCGTCTGCG TCGGGATTTC CCCGGTGTGC AGATCCATTC TCTGTCCCCC
GCCGAAATCG TTCATCTGGC CAATCAGTCC GGCCTGACCG TGGAGGAATG CCTGCGCCGG
TTGCAGGCCG CCGGTCTGGC TTCCCTGCCG GGTGGCGGTG CGGAAATCCT GGTCGATCGC
GTGCGGCGCC GCATCTCGCC GGACAAAATC GGCTGGCGCA AGTGGGTTGA AGTCATGGAA
ACTGCCCATC GGATGGGATT ACCCGGCACT GCGACCATGA TGTTCGGTGC CGGTGAAACC
GATGAGGATA TCGTCACCCA TCTGTTGCGG GTGCGCGCTC TGCAACAACG CACCAACGGA
TTCAGCGCCT TCATCCCCTG GTCCTACCAG CCCGGCAATA CCGAACTCGG CGGCGAGGAG
GCCACCGGCA TCGATTACCT GCGGGTACTG GCGGTATCCC GACTGGTACT GCACAATATT
CCCAATATTC AAGGCAGCTG GGTCACCCAG GGCGGCAAGC TGGCCCAGGT CGCGCTGTTC
TTCGGCGCCA ACGATCTGGG CGGTACCATG CTCGAGGAAA ACGTGGTGGC CGCTGCAGGC
GCAACCTTCC GGCTGGATCG CGAGGAGCTG CTGGCGCTGG TGCGTGAGGC CGGTTTTGTG
CCTGCCCGGC GGACGACGGG GTATGAAATC CTGGAAGAGT ATGTTTAA
 
Protein sequence
MLNVIAEKLE GGQALNRKDA LYLLQQADLL ALGRMADGVR RRLHPQGRVT FVVDRNVNYT 
NVCRTGCRFC AFYRQLDDSD AYLLSHAQIL DKVAELAACG GTQLLLQGGL HPELRIAWFE
ELFRRLRRDF PGVQIHSLSP AEIVHLANQS GLTVEECLRR LQAAGLASLP GGGAEILVDR
VRRRISPDKI GWRKWVEVME TAHRMGLPGT ATMMFGAGET DEDIVTHLLR VRALQQRTNG
FSAFIPWSYQ PGNTELGGEE ATGIDYLRVL AVSRLVLHNI PNIQGSWVTQ GGKLAQVALF
FGANDLGGTM LEENVVAAAG ATFRLDREEL LALVREAGFV PARRTTGYEI LEEYV