Gene Pcar_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0319 
Symbol 
ID3725906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp400063 
End bp401151 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content63% 
IMG OID637749899 
Producthypothetical protein 
Protein accessionYP_355749 
Protein GI77917934 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 
TIGRFAM ID[TIGR00423] radical SAM domain protein, CofH subfamily 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0000596234 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATATCCT TATCTGACAT CGCCGCCAAG GTCGAAGCCG GCCACCGCCT CAGCGAGGCC 
GAGGCGGTTT TTCTGCTGCA GTCATCCGAT CTGTTGGCGG TAGGCGAACT GGCGGCCCTG
GCCAATCGGC GCCTGCATGG CGATAAGGTC TATTTCAATG TCAACCGCCA CATCAATTAC
ACCAATATTT GCGTGAATAA CTGCGCTTTC TGTGCGTTCC GGCGCGATGA CGGGGCGGCA
GGAGGTTATA CCCTGAGCCT GGAGCAGGTT GCCGCACGGG CCAAACAGGC CGCCGCCGCG
GGAGCCACCG AGGTGCATGT GGTGGGCGGG TTGCATCCGC ATCTGCCGCT GGCGTTTTAC
GAACAGATAC TGCGTACCAT TCGCGAGAGC GGTCCGGATC TGCATATCAA GGCCTTTACC
GCCGTGGAGC TGGCGCATTT TTCCGCCATC AGCGGCCGGC CGCTGGAAGA AGTCATCGGC
CGTTTGCAGG CGGCCGGCCT GCAGTCGCTG CCCGGTGGCG GCGCGGAGGT TTTCGCCGAA
CGCGCCCGGG CGCACCTCTG CCCGGAAAAG ATTTCCGGCA CCCGCTGGCT GGAGGTGATG
CGCACCGTCC ATCAGGCCGG TCTGCGCTCC AACGCCACCA TGTTGTTCGG CCATCTGGAG
ACTCCGGTCG AACGTATCGA GCACCTGGCC CGACTACGCG CTTTGCAGGA TGAAACAGGC
GGCTTCCAGG CGTTTGTGGC ATTGCCGTTT CAGGATGTGG GAACCCGTCT CGACGGGGTA
CGGGGGCCCG GCGGGGTCGA GATTCTCAAA ACCCTGGCGG TGGCACGACT GTTCCTCGAT
AACATTTCCC ATATCAAGGC CTACTGGGTG ATGCTCGGCG TCAAATTGGC GCAGGTGGCC
CTGGCTTTCG GCGTCAACGA CCTGGACGGC ACCGTAGTGG AAGAGCAGAT CGGTCATCAG
GCCGGCGCCG CTTCCCCCCA GGCTTTGAGC CGCGAGGGGC TGGTGCGCAT GATTCTCCGG
GCTGGACGTA CGCCGGTTGA GCGGGACAGC CTGTACCAAG ACCTGGGGCG GGAGCGGTCA
GGATGCTGA
 
Protein sequence
MISLSDIAAK VEAGHRLSEA EAVFLLQSSD LLAVGELAAL ANRRLHGDKV YFNVNRHINY 
TNICVNNCAF CAFRRDDGAA GGYTLSLEQV AARAKQAAAA GATEVHVVGG LHPHLPLAFY
EQILRTIRES GPDLHIKAFT AVELAHFSAI SGRPLEEVIG RLQAAGLQSL PGGGAEVFAE
RARAHLCPEK ISGTRWLEVM RTVHQAGLRS NATMLFGHLE TPVERIEHLA RLRALQDETG
GFQAFVALPF QDVGTRLDGV RGPGGVEILK TLAVARLFLD NISHIKAYWV MLGVKLAQVA
LAFGVNDLDG TVVEEQIGHQ AGAASPQALS REGLVRMILR AGRTPVERDS LYQDLGRERS
GC