Gene Pcar_0318 details

Gene Information

• Locus tag: Pcar_0318
• Symbol: ubiX
• ID: 3725905
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 399461
• End bp: 400066
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637749898
• Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
• Protein accession: YP_355748
• Protein GI: 77917933
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase
• TIGRFAM ID: [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.00000206595
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACATA TTCTTGTGGC CATAACCGGC GCCTCCGGCG CAGTGTACGG CCTGCGCCTG 
GTCGAAGAGC TGCTGGCTTC AAAATGCCGG GTAACCCTGC TGCTGAGTCG TTCCGGTCGG 
CAGGTGCTGG CCCATGAAAC CGGACTGGAT TGGCAGGGCT CCGTCGCGCA ACGACTGCGA 
AAAATGCGCG AGCATTTCAC CTGCGGCGAA CAGCTGATGC ATTACGATGA AGACGATATG 
TTTGCACCGC CGGCCAGCGG CTCCGCATCG CCGACCGCTA TGGTTGTGGC GCCCTGTTCC 
ATGGGTACCG CAGGGCGGTT GGCGGCCGGC ATCAGCGGCA ATCTCATTGA ACGGGCGGCG 
GATGTGGCCC TGAAAGAGGG GCGGACGTTG CTGCTGGTGC CTCGGGAGAC GCCGTTGTCG 
GCCATCCACC TGGAGAACCT GTTGCGCTTG TCGCGTGCCG GGGCACGTAT CGTGCCGGCC 
ATGCCGGCCT TTTACCAGCA ACCGCAAAGC ATGGCCGAGC TGATCGATTT TATGGTCGGG 
AAAATACTCG ATGGGCTGGG CATCGAACAT AAACTCTTCC GGCGTTGGGG GGATGACGCC 
TCGTGA 

 

Protein sequence

MQHILVAITG ASGAVYGLRL VEELLASKCR VTLLLSRSGR QVLAHETGLD WQGSVAQRLR 
KMREHFTCGE QLMHYDEDDM FAPPASGSAS PTAMVVAPCS MGTAGRLAAG ISGNLIERAA 
DVALKEGRTL LLVPRETPLS AIHLENLLRL SRAGARIVPA MPAFYQQPQS MAELIDFMVG 
KILDGLGIEH KLFRRWGDDA S