| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0313 |
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| Symbol | nifE |
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| ID | 3725900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 393337 |
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| End bp | 394689 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637749893 |
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| Product | nitrogenase MoFe cofactor biosynthesis protein NifE |
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| Protein accession | YP_355743 |
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| Protein GI | 77917928 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01283] nitrogenase molybdenum-iron cofactor biosynthesis protein NifE |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00000260706 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAACTA AACCAAAAAT TCGAGAATTG CTGGACGAGA GTGCCTGCGC TCACAACAAA
ACCAAGACGG CTGGCTGTAA CAAAACAGTC CCCGGTGCCA CTACTGGCGG ATGTGCCTTC
GAGGGGTCGC AGATCTCTCT TTTCCCTTAT GCCGATGCAG CGCATCTGGT GCACGGTCCC
ATAACCTGCG TGGGGGCTTC CTGGGAAACC CGGTTGACCC GAACCAGTTG GCAGGGCCGC
GATATGACCC AGATGGGTTT TACCACCGGC ATTTCCACCA ACGACGTGGT CTTCGGCGGG
GAGGAAAAAT TACGGCAATC CATCGACTAT ATCGTTGGGC ATTACGCCCC TCAGGCGGTA
TTTGTCTACA GTACCTGCGT TACGGCCATG ATCGGTGATG ATATCGATGC CGTCTGCCGT
CAGGCACAGC AGGACCATGG TATTCCCATG GTGCCGGTAC ACGCTCCCGG TTTTGTCGGC
GGCAAAAATC TCGGCAGCCG GCTGGCTGGC GAAGCGGTGC TGACGCATCT GATCGGCACT
CTCGAGCCGG AGGAAACGAC GCCTTTCGAC ATCAACCTGA TCGGCGATTA CAACGTTACC
GGCGATATGT GGCAATATGC TCCGCTGCTG AAGGAACTCG GCATTCGGAT ATTATCCACC
CTGAGTGGCG ACGGCCGGGT GGCCAGGATA CGCACCGCGC ACCGCGCGCA CCTCAATGTT
CTGGTGTGCG CCAAGTCACT GATCTCGCTG CCGCGTAAAC TCAAGGAAAA ATACGGCATT
CCGTTCATCT CCGTGTCCTT TTACGGTAAG CGCGATACCA GCGCCAGCAT TCTCGCCATC
GCCGAAGGCC TTGGCGATGC CGACCTGATC GCCCGCACCA AGCAGCTCAT TGCCCGCGAA
GAGGCCCGTC TGGAAGAACG CCTTGCTCCC TACCGGGAGA TTTTCCGCGG CAAGAAGGCG
GTGTTGAATA CCGGCGGCAA CAAATCGTGG TCCATCGCCT CGGCTTTGCA GGATCTGGGC
ATCGAGGTTG TAGCCACTTC GGTAAAAAAA TCCACCCAGG TGGACAAGGA AAAGGCGCGT
AAGTATCTGG GGGAAAAAGG GGTGCTGATG ACCAACCCGG GAGCGGAGCA GGCCAAAATT
ATCGACCAAA CCGGTGCCGA CCTGCTGCTG GCGGGAGGAC GCAGTCTATA TACGGCCATC
AAGAAGAAGA TCGCTTTCGC TGATGTCAAC CAGGAGAAAA AGAAGAGTTA CGGCGGTTAC
GAGGGGTTGC TCAATCTGGC CGAAGATCTG AAAAATGCCC TGGAAAATCC GGTATTCAAA
AACGTCGCAA GGAGGGCACC GTGGGAGAAA TAA
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| Protein sequence | MATKPKIREL LDESACAHNK TKTAGCNKTV PGATTGGCAF EGSQISLFPY ADAAHLVHGP
ITCVGASWET RLTRTSWQGR DMTQMGFTTG ISTNDVVFGG EEKLRQSIDY IVGHYAPQAV
FVYSTCVTAM IGDDIDAVCR QAQQDHGIPM VPVHAPGFVG GKNLGSRLAG EAVLTHLIGT
LEPEETTPFD INLIGDYNVT GDMWQYAPLL KELGIRILST LSGDGRVARI RTAHRAHLNV
LVCAKSLISL PRKLKEKYGI PFISVSFYGK RDTSASILAI AEGLGDADLI ARTKQLIARE
EARLEERLAP YREIFRGKKA VLNTGGNKSW SIASALQDLG IEVVATSVKK STQVDKEKAR
KYLGEKGVLM TNPGAEQAKI IDQTGADLLL AGGRSLYTAI KKKIAFADVN QEKKKSYGGY
EGLLNLAEDL KNALENPVFK NVARRAPWEK
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