| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0293 |
|---|
| Symbol | fkpA |
|---|
| ID | 3723341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 367411 |
|---|
| End bp | 368106 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637749873 |
|---|
| Product | FKBP-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_355723 |
|---|
| Protein GI | 77917908 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000000000464642 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT GTTTCTCAGT GATGCTTATG ATGCTCATCT CGATCTCGCT CACAGCCTGC
AAAAAAGAAC TTAAAACCCC CGAAGAAAAA CTTGGCTATG TTTTAGGCGC CGACGTGGGC
AAATCCTATA AGACATTCAA GGAGAACGAA GTCAATTTTG ATGAAGAGGC ATTTTTTAAG
GGTTTTACCG ATGGGATGAA TGACAGCGAA CTGTTATTGA CAGCTGATGA GATAAAAGCT
GTGCAAGTGG AAGCCATTAC AAAACTCAAA AAGAATTTGG AATTAAAAAA GGCTTCTGAG
GCAGAAAAAA ACCTCAAAGA AGGGGCACAG TTTCTCGTTG AAAATAGTGA AAAAGAGGGT
GTCGTGGTGA CCAAATCCGG TCTCCAGTAT CAAGTTTTGA CAAAAGGCGA TGGGCCGGTG
CCGGTGGCTA CGGATACGGT CAAAGTCCAT TATGTCGGTA AATTGCTGGA TGGAACTGAA
TTTGACAGCT CCTACACCCG TGGAAAACCT GCAGAGTTCA GAGTTGGCGG CGTGATTAAA
GGCTGGTCCG AGGCATTGCA GATGATGCCT ACAGGGAGCA AATGGAAACT GTTCATTCCC
AGCGAGCTTG CTTATGGTGC GAGGGGCGCC GGACAGAAGA TCGGCCCTAA TGCCACGCTT
GTTTTTGAAG TTGAACTCCT TGAAATCGTA AAATAA
|
|---|
| Protein sequence | MKKCFSVMLM MLISISLTAC KKELKTPEEK LGYVLGADVG KSYKTFKENE VNFDEEAFFK
GFTDGMNDSE LLLTADEIKA VQVEAITKLK KNLELKKASE AEKNLKEGAQ FLVENSEKEG
VVVTKSGLQY QVLTKGDGPV PVATDTVKVH YVGKLLDGTE FDSSYTRGKP AEFRVGGVIK
GWSEALQMMP TGSKWKLFIP SELAYGARGA GQKIGPNATL VFEVELLEIV K
|
|---|
| |