| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0289 |
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| Symbol | ompK |
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| ID | 3723337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 360647 |
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| End bp | 362071 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637749869 |
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| Product | outer membrane protein OmpK |
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| Protein accession | YP_355719 |
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| Protein GI | 77917904 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 66 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGTA GATTCTGTCG GATAAAACTG CTGGCCGCTA TTTTAACCTT TCTTCTGGCC
GGTTGCGGGA CCCTGGCTCC CCGTTACACG CGGCCCGCAT CACCTGTGCC GGTGTCCTGG
CCGGAAGGGT CCGCTTATCA GCCTGCAGCC GAGGGGACGG AAACCCGTTC CGCAGCCGAG
GTTGGCTGGC GCGAGTTCTT CGCCAATGAA AAACTGCGAA AACTGATGGA GCTGGCTTTG
GAGAATAACC GCGACCTGCG TGTGTCCGCG CTCAAAATCG AGAAAGCCCG CGCCCAGTAC
CGAATCCAGC GAGCCGATCT TTTCCCGACG CTGAGCATCG CCGGTAAGGG GAGCGTGAAC
CGAACGCCTG CAAGCCTTTC CACCACAGGA AAGCGTGGAA CCTTCGAGGA ATACAGCGTC
GGGCTTGGCA TGAGTTCCTA TGAGTTTGAT TTTTTCGGAC GCGTGCGCAG CCTTAAGGAT
CAGACCCTCG AAGAGTATTT TGCCACCGAA GAGGCCCGTC GTAGCGCCCA GATTACGTTG
ATCGCCGAAG TCGCAACAGC TTACCAGACT TTGGCCGCGG ACAGAGAACG TCTGGACCTG
GCCCGTCAGA CCTTGAAAAG CCATCAGGCG ACCTATGAAC TTACTCGTTC CCGGTTTCAG
GCCGGGTTGG CTACAAAACT CGAAGTTCGC CAGGCGCAGA CCAGTGTCGA TTCGACCCTG
GTCGATATCG CCCGTTATAC AAGCCTTACG GCCGAAGACG AAAATGCTCT GAGGTTTCTT
GTCGGCACCG ATTTTTCGTC AGCCCTTCTC CCCGCTGCCC TGGATGAAGC CGTTACCGAT
TTGAAAGACA TCCCTGCCGG CGTACCTTCG GAAGTGTTGC AGCGTCGCCC CGATATTCTG
GCGGCCGAGC ACCGATTAAT GGGAGCGAAC GCCAATATCG GCGCGGCCCG GGCAGCGTTT
TTTCCCCGAA TAACCCTGAC CGCTTCGGGC GGGTTCGCCA GCGACGCCTT GTCGAGTCTT
TTTGAAGGTG CCACCGGAAC CTGGGCCTTT GCTCCCCGGA TCGAGTTGCC CATCTTTAAT
GCCGGAAGAC TTCGTGCTCA ATTGAAGACA TCGAAGGTGG ATCGGGACAT CTATCTGGCT
CGTTACGAAG GAGCGATCCA GGGTGCATTC CGGGAGGTTG CCGATGCCCT GGCGCAACGA
GGAACCATTG ATGATCAATT GCTGGCGCAA CGTTCACTGG TGGAGGCCAC CGACGAAAGC
TATATCCTTT CTGAAGCACG CTTCAGAAAA GGGATCGACA GCTTTCTCAA TGTTTTGGAT
TCCCAGCGCT CTCTTTACGA CGCACAGCAG AATTTGATTA CCATCCGTCT TGCTCGCCTC
GACAATTTTG TGAAGCTTTA TCGGGTGCTC GGGGGTGGGG CTTAG
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| Protein sequence | MKCRFCRIKL LAAILTFLLA GCGTLAPRYT RPASPVPVSW PEGSAYQPAA EGTETRSAAE
VGWREFFANE KLRKLMELAL ENNRDLRVSA LKIEKARAQY RIQRADLFPT LSIAGKGSVN
RTPASLSTTG KRGTFEEYSV GLGMSSYEFD FFGRVRSLKD QTLEEYFATE EARRSAQITL
IAEVATAYQT LAADRERLDL ARQTLKSHQA TYELTRSRFQ AGLATKLEVR QAQTSVDSTL
VDIARYTSLT AEDENALRFL VGTDFSSALL PAALDEAVTD LKDIPAGVPS EVLQRRPDIL
AAEHRLMGAN ANIGAARAAF FPRITLTASG GFASDALSSL FEGATGTWAF APRIELPIFN
AGRLRAQLKT SKVDRDIYLA RYEGAIQGAF REVADALAQR GTIDDQLLAQ RSLVEATDES
YILSEARFRK GIDSFLNVLD SQRSLYDAQQ NLITIRLARL DNFVKLYRVL GGGA
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