| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0288 |
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| Symbol | acrB |
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| ID | 3723336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 357484 |
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| End bp | 360645 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637749868 |
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| Product | acridine efflux pump |
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| Protein accession | YP_355718 |
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| Protein GI | 77917903 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGGT TTTTTATCAA TCGTCCCATC TTTGCCTGGG TGGTGGCCAT TCTTATTATG
CTGGCAGGTT CTCTGGCGAT TCTCACCATG CCTATCGCCC AATACCCGCC TATCGCGATG
CCCGAAATCC AGGTTCAGGC CCGTTATCCG GGGGCCTCCG CGCAGACCCT GCAGGATGCC
GTCACCCAGA TCATCGAACA GAAGATGACC GGCATCGACA ACCTTCTCTA CATGACCTCC
AGCAGCGACT CAACGGGGCA GGCGACGATT ACCCTGACCT TCAGCAATGC CACCGACCCG
AACATGGCCC AGGTGCAGGT GCAGAACAAG CTGTCACTCG CCACCCCTCT GCTGCCGCAG
GTCGTGCAAA GACAAGGTAT TTCGGTCACC AAGTCGACGA ATAACTATCT GCTGATCATG
GGGCTTGTTT CGGAAGACGC CTCCATGGGC CGCTATGAAG TCGCAGACTA CATGGAGTCG
AACATCAAGG ACGCGCTCGC GCGGCTGCCG GGCGTCGGTG AGCTGGAAAT GTTCGATACC
CAGCACGCCA TGCGCGTATG GCTTGATCCG GACAAACTGA ATAACTATCG GCTGACGCCC
ACCGATGTGG CTTCGGCCAT TCAATCCCAG AACGCGGAAG TCTCGGCCGG AGAGTTCGGA
GGATTGCCGG CCCATCAGGG GCAGCAACTC AACGCCACCA TAACCGTGCG CAACTATATG
CAGACCCCGG AAGAGTTCGG GTCGATCATT CTGCGCACCA ACAGCGACGG TTCCAACGTC
TATCTGCGGG ATGTGGCCGA GGTCAAGGTG GGGGCCGAGC GCTACGACTC CCGCTCTCGC
TACAACGGCA AACCGGCGTC GGCCATGGGT ATCAAACTTG CCACCGGTGC CAACGCTCTT
GATACAGCCG ATCAGGTCAA AGCCAAAATG GCGGAATTGT CGAAATATTT TCCGTCGGGC
CTAAAAGTCG TTTACTCCTA CGACACCACG CCTTTTACCA AGATTTCCAT CAAAACGGTG
GTCCATACCC TGCTCGAGGC GATTGTCCTG GTCTTTCTGG TGATGTTTCT TTTTCTGCAG
AACTTCCGGG CGACGCTGAT TCCGACATTG GCCGTGCCGG TGGTTCTGCT CGGCACCTTC
GGCGTATTGG CGGCAACCGG CTTTTCCATC AACACCTTGA CCATGTTCGC CATGGTGCTG
GCTATCGGCC TGCTGGTGGA CGACGCCATC GTCGTGGTCG AAAACGTCGA GCGCATCATG
AGTGCCGAGG GATTGTCGCC GCGCGAGGCC ACCATCAAAT CGATGAAGGA GATTACCGGC
GCCCTGTGGG GGATTGCCAT CGTGCTGTCG GCGGTTTTCG TCCCGATGTT CTTCTTCAGC
GGATCGGCCG GCATCATTTA TCGCCAATTC TCCATCACCA TCGTTACCGC CATGCTCCTG
TCGGTCCTGG TTGCCATGAT TTTTACTCCG GCTCTGTGCG CCACGCTTTT GAAACCGGTG
GCCAGGGGAC ATGATGTGTC CGAAAGAAGT GTTTTTTTTC GCTTTTTCCG AGGGTTCAAC
CATTGGTTTG ATCGCGGGTC CGGGGGCTAT CGCACAATCG TCGGCCGCAT GATCGGAAAA
CCGAATCGGT ATATGTTGAT TTATTTATCT ATCGTCGTTG TCATGGGCGG GCTCTTCTGG
TGGATGCCGA CCGGGTTTCT TCCCGATGAG GACCAAGGCA TCATGTTCGT CCAGTATCAG
CTGCCGGCTG GTGCGGTGGA AGAGCGGTCT CTGGAGGTCG CCAAACAGAT AGAAGACTAT
TTTCTCAAGG AAGAGGCGGT GGATTCCGTT ATGACGGTTA CCGGTTTCAG TTTTGCCGGC
CGTGGGCAGA ACATGGGCTT CGGTTTCGTC AAACTCAAGG ATTGGGCTTT GCGTAAGAAG
CCGGAACTGC GTGCACAGGC GGTGGCCAAC CGGGCTACAA AAGCCTTTTC CACCATCAGG
GACGGCATTG CTTTCGCTTT TCTGCCGCCG CCGGCCACCG AACTGGGCAA TGCCACCGGT
TTCGATGTTC GGCTGGTCGA CCGGGGTGGG CTGGGTCATG ACAAGCTCAT GGCCGCCCGC
GATCAGCTCC TGGGCCTGTC CCAAGGGAAT CCGGCTCTGA CCAAAGTGCG CCCTAACGGC
ATGGATGATA CGCCCATGTT CAAAATCGAT CTGGATGATA ACCGGGCCGG AGCCAGTAAG
GTCGAACTTG GCGATGTCAA CGATATTATC AACACCGCCT GGGGGAGCCT CTACGTCAAC
GATTATATCG AGAACGGCCG GGTGAAGAAG GTTTACCTGC AGTCTGCGGC GAATTTCAGG
ATGCTCCCCG AGGATATCGG CAGATGGTAT GTGCGCAATA CCGCCGGAGA TATGGTGCCG
TTTTCCGCCT TCGCGACGGC CCGTTGGATC TATGGATCCC CGCGTTTGGA ACGCTACAAC
GGTTTGCCCG CCGTAGAAAT TCTGGGAGAG CCGGCGTCCG GCGAGAGTTC CGGTACGGCC
ATGAAAGAGA TAGAGAAGAT GGCGGCACAG TTGCCTGCGG CGATCGGCTG CGAATGGACA
GGACTTTCTT TCCAGGAACG GGCCGCCGGT GCCCAGACCA TGTTTCTTTA CGCCACATCT
CTGGTCGTTG TGTTTCTTTG CCTGGCGGCT CTCTACGAAA GTTGGGCCAT CCCCGCATCG
GTCATGCTCG TCGTACCGCT GGGGGTTGTC GGTGCCTTGT TGGCGGCCTC GGCCCGCGGT
TTTTCCAACG ATGTCTATTT TCAGATAGCC ATTCTGACGA CCATAGGTCT TTCCGCCAAG
AACGCCATCC TGATCGTGGA ATTCGCCAAG GAGAGGATGC ATTTCGGCAT GGGGCTGCTG
GAGGCAACGG TGGAAGCCGC CCAACTGCGC CTGCGGCCGA TCCTGATGAC CTCCCTCGCG
TTCTTTTTCG GGGTGCTGCC CATGGCTCTG AGCAAAGGGG CCGGTTCCGG AGCCCAGAAC
TCTATCGGAA CCGGTCTGGT GGGCGGCATT ATCTCCGGCA CCCTGCTGGC GATATTTTTT
GTGCCGGTGT TCTTTGTCGT TGTTCGAAAG GTCTTTCCTA TCCGCGAGCG AGAGACAATC
GCCGCAACAG TTTCGGAAGA ACCCGCCGTG GAGACGTATT AA
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| Protein sequence | MARFFINRPI FAWVVAILIM LAGSLAILTM PIAQYPPIAM PEIQVQARYP GASAQTLQDA
VTQIIEQKMT GIDNLLYMTS SSDSTGQATI TLTFSNATDP NMAQVQVQNK LSLATPLLPQ
VVQRQGISVT KSTNNYLLIM GLVSEDASMG RYEVADYMES NIKDALARLP GVGELEMFDT
QHAMRVWLDP DKLNNYRLTP TDVASAIQSQ NAEVSAGEFG GLPAHQGQQL NATITVRNYM
QTPEEFGSII LRTNSDGSNV YLRDVAEVKV GAERYDSRSR YNGKPASAMG IKLATGANAL
DTADQVKAKM AELSKYFPSG LKVVYSYDTT PFTKISIKTV VHTLLEAIVL VFLVMFLFLQ
NFRATLIPTL AVPVVLLGTF GVLAATGFSI NTLTMFAMVL AIGLLVDDAI VVVENVERIM
SAEGLSPREA TIKSMKEITG ALWGIAIVLS AVFVPMFFFS GSAGIIYRQF SITIVTAMLL
SVLVAMIFTP ALCATLLKPV ARGHDVSERS VFFRFFRGFN HWFDRGSGGY RTIVGRMIGK
PNRYMLIYLS IVVVMGGLFW WMPTGFLPDE DQGIMFVQYQ LPAGAVEERS LEVAKQIEDY
FLKEEAVDSV MTVTGFSFAG RGQNMGFGFV KLKDWALRKK PELRAQAVAN RATKAFSTIR
DGIAFAFLPP PATELGNATG FDVRLVDRGG LGHDKLMAAR DQLLGLSQGN PALTKVRPNG
MDDTPMFKID LDDNRAGASK VELGDVNDII NTAWGSLYVN DYIENGRVKK VYLQSAANFR
MLPEDIGRWY VRNTAGDMVP FSAFATARWI YGSPRLERYN GLPAVEILGE PASGESSGTA
MKEIEKMAAQ LPAAIGCEWT GLSFQERAAG AQTMFLYATS LVVVFLCLAA LYESWAIPAS
VMLVVPLGVV GALLAASARG FSNDVYFQIA ILTTIGLSAK NAILIVEFAK ERMHFGMGLL
EATVEAAQLR LRPILMTSLA FFFGVLPMAL SKGAGSGAQN SIGTGLVGGI ISGTLLAIFF
VPVFFVVVRK VFPIRERETI AATVSEEPAV ETY
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