Gene Pcar_0275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0275 
SymbolargE 
ID3723362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp343238 
End bp344443 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content63% 
IMG OID637749856 
Productacetylornithine deacetylase 
Protein accessionYP_355706 
Protein GI77917891 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000000141091 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACAC GTTGGGAAAC CTTGCGTTCG CACCTGCGTC GCGACCGTTT GCATCGATTG 
TTGTGGGAGA TGGTGGAGAT CTATTCCCCC TCGGGTAAGG AGGAGGATAT TCAGCTGTTT
CTCGAAAAAA CCCTGCAGGA TGCGGGTTTG ACCGTGTATC GGGAGCCCCT TGACGAGACC
CGCTTCAATT TGCGTTGCGT GCTGGGGGCT GGCGAACCCG ATTTTTACCT GGTGGGGCAT
GTGGATACCG TGGCCGACTG GGATCTTCAG GAAACGGGGC CGCGTCAGCA GGGTGGCACC
TTCCACGGGC TCGGCAGCGC CGATATGAAA GCCGGTTGCG CGGCCATGGT CGAAGCTTTT
TTGACCCTGG CCGAAAACCT GCCTGCCGAA CAGCAGCCGT CGGTGGGGCT GCTGTTGGTG
GTGGGCGAAG AAGAGGACGG TGCCGGCAGT CTGGCTTTTC TCGCCGAACG CCGGCCCGCC
TGGGTGGTCA TCGGCGAGCC GACCGGCCTG CAGGCCTGCT GCGCGCATTA CGGCTACGTG
GAGGTGGTGC TGACCACCAG CGGGCGGCGC AGTCATTCCT GCCTGCCGGA GCAGGGCCAC
AATGCCGTGG AGTCGATGCT GCGCGTGTTG CTGCAGCTGG GCCGCATACC GCTGCTGCGC
AAGCCTGACA GCGGTCTGGT CTACTCCATC CGCGAAATGA ATTCATCCCA GGCCGGTTTC
GTGGTGCCGG ATCGCTGTGA GACGTGGATC GATCTGCACC TGGCACCGAC TCTCGATCTC
GACCGGACCA TCGCGACTTT GCGGCGGCGC CTCGACGTGG CCCGTCGGCA TATCCCCGGA
CTCGAACTCG AGGTGGAGAT TCCCTGGGCG AGTCGCAGTT ACGATCTCGG CAGCGACCAT
TGGCCGGGGC ACGCTCTGGC AGAGCTGTAT CCCCGTCTGG CACGGCCACT GGCGTTTACC
GCCTTTCGTT CCCACTCCGA CGGTAACCTG TTTTATGAAA AAGGCACCCG GCCTTTACTG
CTGGGGCCCG GTTCGCTGGA GACCGCCCAT ACCTGGGACG AGCAGGTACC GCTGGAAGAG
GTCGACCTGG CGGCGGCCAT CTATCTGGGG TTGTGCCTGG CCGCACCGGG GCCGCGCGAT
GGGTCCCTGT TGTTTGGGGG GAATGAGGGT ACGGATGATC CGGAGGGGCG GCAGTCGTTT
GCATAG
 
Protein sequence
MVTRWETLRS HLRRDRLHRL LWEMVEIYSP SGKEEDIQLF LEKTLQDAGL TVYREPLDET 
RFNLRCVLGA GEPDFYLVGH VDTVADWDLQ ETGPRQQGGT FHGLGSADMK AGCAAMVEAF
LTLAENLPAE QQPSVGLLLV VGEEEDGAGS LAFLAERRPA WVVIGEPTGL QACCAHYGYV
EVVLTTSGRR SHSCLPEQGH NAVESMLRVL LQLGRIPLLR KPDSGLVYSI REMNSSQAGF
VVPDRCETWI DLHLAPTLDL DRTIATLRRR LDVARRHIPG LELEVEIPWA SRSYDLGSDH
WPGHALAELY PRLARPLAFT AFRSHSDGNL FYEKGTRPLL LGPGSLETAH TWDEQVPLEE
VDLAAAIYLG LCLAAPGPRD GSLLFGGNEG TDDPEGRQSF A