| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0272 |
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| Symbol | |
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| ID | 3723359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 339482 |
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| End bp | 340723 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637749853 |
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| Product | NupC family nucleoside transporters permease |
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| Protein accession | YP_355703 |
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| Protein GI | 77917888 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.00459366 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGTCG TACGGGGCCT GCTCGGTTTG CTGGCGCTTA TCATCATTGC CTGGCTGTGC
AGCGAAAATC GTCGCCGGCT GCCGGTTAAA ACCTTGCTGG CAGGGCTGTC CTTTCAGATC
CTGCTGGCCC TGCTGTTGCT GAAACTGCCG GGCTTTCGCG GTTTTTTCCT GTCTCTCAAT
CAACTGTTCC TGGCCCTGGA TCGCGCCACG GCCGCCGGCA CGGGGCTGGT TTTCGGGTAT
CTGGGCGGCG GCCCCCTGCC CTTTGTCGAG ACGACTCCCG GCAGCGCGTT TATCCTCGGT
TTCCGTTCCC TGCCCCTGGT GCTGGTCATG AGCGCCCTGT CGGCACTGCT GTTTTATTGG
CGCGTTCTGC CGCTGGTGGT GCGGCTGCTG TCGGGCCTGC TGCGGCGGGT GCTGCCCATC
GGCGGTGCGG TTGCGGTCGG CGCAGCGGCC AACATCTTCG TCGGCATGGT GGAGGCACCG
TTGCTGATCC GCCCGTACCT TAAAACCCTC AGCCGCAGCG AACTGTTTAT GGTCATGACC
TGCGGCATGA GTACCATTGC CGGCACCATG CTGGTGCTGT ATGCCGGTTT CCTGCAGCAT
GTCATTCCCG ATGCCCTGGG GCATATTCTC ATCGCGTCGC TGATCAGCGC GCCGGCCGCG
ATCGTCATTG CCCAGGTCAT GGTCCCCCCC GACGGTCCCC CGACGGACGG CGGGCTGGCC
ACCCTCGAAC CGGCTGACAG TGCCATGGAT GCCGTCACCA GGGGAACCAG CGAGGGGCTC
AAACTGTGGC TGAACATCCT GGCCATGCTC ATCGTGCTGG TGGCGCTGGT CTACCTTGCC
AACGAACTGC TGGGCCTGCT GCCCGCCATG GACGGACGGG CCTTGACCCT GCAACGGCTG
CTCGGCTGGC TGCTGGCACC CGTGGCCTGG GTCATCGGCA TCCCCTGGCA GGAAGCCACC
ACGGCCGGCA GTCTGCTCGG CACCAAGGTC ATCCTCAACG AACTGCTGGC TTACCTCGAC
ATGGCGCGAC TGCCGGCGGC CGCCCTGTCG GAGCGCAGCC GTCTGATCCT GGCCTATGCG
CTCTGCGGTT TCGCCAATTT CGGCTCGCTG GGCATCATGA TCGGCGGCAT GGGCACCATG
GTTCCCGAAC GGCGCAGCGA AATCGTAAAT CTGGGGCTGA AATCGATCAT GGCCGGCACC
CTGGCTACCT GTATGACCGG CGCGGTGATC GGCATGTTGT AA
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| Protein sequence | MFVVRGLLGL LALIIIAWLC SENRRRLPVK TLLAGLSFQI LLALLLLKLP GFRGFFLSLN
QLFLALDRAT AAGTGLVFGY LGGGPLPFVE TTPGSAFILG FRSLPLVLVM SALSALLFYW
RVLPLVVRLL SGLLRRVLPI GGAVAVGAAA NIFVGMVEAP LLIRPYLKTL SRSELFMVMT
CGMSTIAGTM LVLYAGFLQH VIPDALGHIL IASLISAPAA IVIAQVMVPP DGPPTDGGLA
TLEPADSAMD AVTRGTSEGL KLWLNILAML IVLVALVYLA NELLGLLPAM DGRALTLQRL
LGWLLAPVAW VIGIPWQEAT TAGSLLGTKV ILNELLAYLD MARLPAAALS ERSRLILAYA
LCGFANFGSL GIMIGGMGTM VPERRSEIVN LGLKSIMAGT LATCMTGAVI GML
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