Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0231 |
Symbol | |
ID | 3722743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 295217 |
End bp | 295924 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637749812 |
Product | ABC-type transport system, ATPase component |
Protein accession | YP_355662 |
Protein GI | 77917847 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 92 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCGTGT TAAAAGCAGC CATAGTTAAA AAATTCCCGA CCTTCGCCAT AGAGGCCGAA TTGGCTTTTG AACAGGGTAT TCTGGTGTTG TTCGGTCCTT CGGGGTGCGG CAAAACCACC CTTCTAAACT GTCTGGCCGG CCTGCAAAAA CCGAGCGAAG GGCAGATTTC CCTGGGCGAA AGGGTTTTCT TCAGTTCCGC GAAAAAGATC AATGTGCCGG CACGTCTGCG GCGCATCGGG TATGTTTTCC AGGATTATGC ATTGTTTCCC CACATGACGG TCAAGGACAA TGCACTGTAT GGAATCCCGT CAGGGGCCTG CCGCTGGGTG GAAAAGGGCG CAGAGGCCAT CTCGGTGTGC GAAGTGCTCG ACATGCTTCG CATAACGCAT CTGCAACAGC GCTATCCGGG CCAGCTGTCC GGTGGTGAGA AACAAAGAGT CGCTTTGGCC AGGGCACTTA TGATGGCGCC GGATCTGTTG TTGCTGGATG AGCCGCTGTC CGCTATCGAT TCCGGGACCC GGCAGGCGCT TCAACAGGAA TTAAAAAAAA TTCAGCGTAC CTGGAACATT CCGTTTGTCC TGGTGACCCA TAGCCGCAAG GAAATGGATG CACTGGCCGA TGAAGTGGTT TTCCTCAAGG AGGGTAAGTC CGCGGCATCC ACCACCTGGG CATTGCCTGT CGGTTGTACC ACAGGTCAGT GGATCTGA
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Protein sequence | MCVLKAAIVK KFPTFAIEAE LAFEQGILVL FGPSGCGKTT LLNCLAGLQK PSEGQISLGE RVFFSSAKKI NVPARLRRIG YVFQDYALFP HMTVKDNALY GIPSGACRWV EKGAEAISVC EVLDMLRITH LQQRYPGQLS GGEKQRVALA RALMMAPDLL LLDEPLSAID SGTRQALQQE LKKIQRTWNI PFVLVTHSRK EMDALADEVV FLKEGKSAAS TTWALPVGCT TGQWI
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