Gene Pcar_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0187 
Symbol 
ID3723000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp234436 
End bp238362 
Gene Length3927 bp 
Protein Length1308 aa 
Translation table11 
GC content63% 
IMG OID637749764 
Producthypothetical protein 
Protein accessionYP_355618 
Protein GI77917803 
COG category[S] Function unknown 
COG ID[COG2911] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACGCT ACGTACTCCA TATTCTTGGC GGGCTGGTAC TGCTGGGCAC TCTGGCCTTC 
GTGTTCGGGT GCTATTGGGT GATGGCCACA GCCGGGGGCT CCGCCTGGCT GATCCGTACC
GTGGCAAGCC GCATGCCGGA GACCGTTGCC GTCCAGACCG TCGAGGGGCG TCTTACCGAC
GAACTCAGAT TGTCCGGCCT GGAAGTGCGC TGGACCGGGG GCACAGCGAC CATCGGCCGG
CTGACATGGC GCTGGCGCGC CGCCGGGCTG CTGCACAGAA ACGTGCGCAT CCGCTCTCTG
AACCTGGAAG ATGTGACCCT TGTCACAATC CCCGAAAAAG ACCAGCCACG CGAACCCCTT
GATCTGGCCT GGCCCGAGCT GCCCGGCTGG ATGCAGAAAA TCCACGTCGC CCTGGACGAT
GTGCAGATCA AGCGACTCAG ATGGCAACAA CCGGATGGGC CCTCGTTTTA TCTGCAAGGA
CTGGCCGCCA AGGCCCGTTG GACGGGACGG CGACTGCGCA TCCCGATAGT TACGGCACTG
AGCGATGCGG GGGCATGGAC CGCCCGTGCC GCAATCGACT GGCACCAACC GGGACTGCGA
CTAAAAGGGG CAGCGCTGAC CAAACCGGAC ACGCAAACCG CTGTGCCCCT GATTCTGGCG
CTGACCCTGC AGCCCGGGGA GCAACCCGGG TCGCTGACCG GCACTCTGCA TGCCGGCGCA
CAGGCGCCTG CGGCAGGTAT TCTGCAACTG GCCACGCCCT TTGTCGTGAC ACCGACCGAC
CTGAGGCTGG ACAACTTCGA CCTGCGGAGC TTGTCATCGA CAGGCTCCCT CCACGGCAAG
GTGCGCCTTG ACTGGGCCGA ACCCAAACCC CGGCTCGAAC TCTCCGCCGA CCTGAAGAAC
CTGGATCTGG CCACACTGGC AGGGCAGACG ACCCATCTGG ATGGACACCT GACGCTGAAG
GCTGACCCGG ATGCCTATGC GGGAACGCTG GCACTGAACA ACCGGGCGAC GCAATGGCGG
GATCTCCGGC TCGAAACCTC CTTCAGCGGT AATCGCCAGA ATTTAGATCT CACCGATCTC
AACATCCATG GGCTGGATGG CACCATCGAC GGCGATGCCA ATGTGCGCTG GACACCGCAA
CTGAGCATCC GCGGCAAACT CAGCGGCCAT GACCTCAACC CCCAACGTGC CGGTCTGGCC
TGGCCGGGCA ACATCAACCT GCAGGCCGAG GGCGTATGGA GTCGCCTCGA TCAGGGCGGT
ATGAGCGCCA GGATTGACGC CCGTTTGCTG CCGAGCACCC TGCGCGACGC CCCCTTGCAG
GGGCAAATCC GGGCCCGGCT GCAAAACGAG GACGTGCAGA TCGACACCTT GCAGCTGCAA
AGCCGGGGCC TCGACCTCAC CGCACGGGGG CGACTGCAGC AGCGTATCGA CTTTGCCGCC
AGGGTCGATG ACCTGGCCAG CCTTGTGCCG GAACTGACCG GAGCCATGCA GGGACGCGGC
TGGATACGCT GGCGCAACCA ACAGGTGGCC GGCGAGCTCA ACGGCAGCGG GCGCGCCCTG
CAACACGGCC AGCTCGGGGT TCGAAATCTT CGTTTTTCCG CCGCCCTGGC AGCGAACCGC
AGCGGCTCCC TCGAGGCCGA CCTGACGGGG TTGCAGTACA ATGATGTTCA AATTTCGGCC
CTTTCCATCC GCGGCAACGG CCGTCCCGAA CAGCATAGCC TGAGCGCCCG CATCACCCTT
CCACGGCAGA CACAGCTGAA GCTGACCGCC GCCGGCGGCT ACGAAAAATC CGCATGGCAA
GGATCTGTGA CCGAACTGAC CCTGCGGGAT GCCATCGACA CCTTGAACCT GGCTGACCCC
GCCGCATTGA GCGTGTCGCA AAAAGGACTC AAGCTTGCCG CACTGCGCCT GACAGGCACC
TCCGGTGAAG CCCTCTCGGC AGCGGCGCAA ATCCAATACG CGCCCCTGAT CGGCCGAGGG
CAACTCGCGT GGGAACAACT TCGCCTGGCC CATGCGCAAG CCTGGCTGGA CGGCACCAAA
ATCACCGGTA ACAGCAGCGG CAACGCCTCA TGGGAACAAA CCGCCGATGG AGCTTTCGCA
CTGCTTGCCG ATCTAAAGAC CGCTGGTTCC CTCGAGCGCG AGGGACGGCA ACTGCACCTG
GCCGGGGCCG AAGCCAGCCT GTCATGGACC CCCGCGCGAT TACAGGCCGA GCTCCATGCG
GACCTCAAGC AAGGGGGACG GCTGCAAGGG CGTATCCAGG GCGGGCGCAG CACATCCATG
ACCCTGCCGG AACAGGCCGA CTGGCAATGG CTCTGCCGGG ATCTGGACCT GCAACTGTTG
GCGCCCTGGC TGCCCTCCGG CATCGCCATC CAGGGTATCC TCTCCGGTCA ATCCACAGGA
AAACTGCTGC CCGGCCGGCA ACTGATCGCC GACGGCCGGA TAACCGTCAC CGGCGGTCAG
ATCGCGACCG ACAAGGAGCA GGGACAGATC ACCGTCCCGG TACAAAATGC CGAGCTGAAC
TGGAACTGGC GCGGTGAGGA GCTTTCTGGC CAAACCGAGG TGCAATTGGG GGATTACGGT
CATCTGAACG GCAGTTTCCG ACTGCCGATT CCGGCGCGTA TGCCCGTAAA ACCGGCGCAA
CAGGGGGCAC TGGACATAAT CATCGACGGC CGCAGCACCG AGTTGGGGCT GTTTGCCGCG
TTGATGCCCG GAGCGGTGCA GGAATCCCGC GGGCGCGTCG AAATCAAACT GCGCGGAGAC
GGTACCTGGC AACAACCGCA ACTGAATGGA CAGGTACAGC TGCTCGAAGC CGGCGCCTAT
CTGCCCATAG CCGGCCTGGA ACTGCAAAAG GTGAATATCC TGGCACGTCT TGACGGGGAT
CGTATCCTGC TCGACAACCT GTCCCTGCAA TCCGGTAAAG GAACCCTGCG GGGCAAAGGC
TCCCTGCAGT TGCACGATTG GAAACCCGGC AACTACAACG TGACCCTGAA GGGCCAGGGC
GTGCAACTGG TCAATCTGCC GGAAATACAG ATACAGGCCG ATCCGGACCT GCTCATTACG
GGTTCAACCT CAGAGCTGAA GGTCACCGGC ACTGTCAAAC TGTCGGAAGT CATGATCCGG
GACAATAAAA AACCGTCGCT CATCACTCCC AGCGACGATG TGGTCATGGT TGGCGAACAG
TCCCCGGAAA AACCTTCCGC CGAATTCCCC ATTCAGGCCG ATATCCGACT GCTGCTGGGA
GACCATGTGC TGGTCAAGGC CTCAGGCCTC GACGCCCGCC TGACGGGAGA ACTGCACTTA
AGCTCCATCG ACAGCAATGC CCTGACCGCC AATGGACGCA TCGCCGTGGC CGAAGGGATG
TACGCCGCCT ATGGCACCCG GCTGGACATC ACGCGCGGCA ATCTTCTGTT CAACGGGCCG
CTTGCGCAAC CGACCCTGGA TATCGTCGCC CTGCGCACCG TCGGCAAGAT CAAGGCGGGG
GTCCAGGTCA GCGGCACGCC CCGCCTGCCG GTGGTTAAAC TCACTTCCGA ACCGGCCATG
TCCGACAGCG ACCGGCTGGC GTATATCGTA CTGGGCCGGG CTTCGGCGCG CAATGCCGGG
GAAGCCGATC TGTTGATGAC CGCCGGCGGG CTGCTGCTTT CCCAGGGGGA ATCGGTGGTC
ATGCGCGATC GCCTCAAACG GCAACTGGGA GTCGATGTCC TGGGCTTTGA AACCGGCAGC
GCCACCGGCC AGGACGATGT CTCCAGCTCG ATGCTGACCA TCGGCAAGTA TCTCAGTCCC
AGCCTGTATG TCAGTATCGG CCAGTCCCTG TTCGCCAATA CCCAGGAATT CCGATTGCGC
TACAGCCTGG GCAAGCACTG GCAACTGGAA TCGACCACCG GCGAGGAAAG CGGCGTAGAC
CTGTATTACA AGATTGAATT CCGGTAA
 
Protein sequence
MKRYVLHILG GLVLLGTLAF VFGCYWVMAT AGGSAWLIRT VASRMPETVA VQTVEGRLTD 
ELRLSGLEVR WTGGTATIGR LTWRWRAAGL LHRNVRIRSL NLEDVTLVTI PEKDQPREPL
DLAWPELPGW MQKIHVALDD VQIKRLRWQQ PDGPSFYLQG LAAKARWTGR RLRIPIVTAL
SDAGAWTARA AIDWHQPGLR LKGAALTKPD TQTAVPLILA LTLQPGEQPG SLTGTLHAGA
QAPAAGILQL ATPFVVTPTD LRLDNFDLRS LSSTGSLHGK VRLDWAEPKP RLELSADLKN
LDLATLAGQT THLDGHLTLK ADPDAYAGTL ALNNRATQWR DLRLETSFSG NRQNLDLTDL
NIHGLDGTID GDANVRWTPQ LSIRGKLSGH DLNPQRAGLA WPGNINLQAE GVWSRLDQGG
MSARIDARLL PSTLRDAPLQ GQIRARLQNE DVQIDTLQLQ SRGLDLTARG RLQQRIDFAA
RVDDLASLVP ELTGAMQGRG WIRWRNQQVA GELNGSGRAL QHGQLGVRNL RFSAALAANR
SGSLEADLTG LQYNDVQISA LSIRGNGRPE QHSLSARITL PRQTQLKLTA AGGYEKSAWQ
GSVTELTLRD AIDTLNLADP AALSVSQKGL KLAALRLTGT SGEALSAAAQ IQYAPLIGRG
QLAWEQLRLA HAQAWLDGTK ITGNSSGNAS WEQTADGAFA LLADLKTAGS LEREGRQLHL
AGAEASLSWT PARLQAELHA DLKQGGRLQG RIQGGRSTSM TLPEQADWQW LCRDLDLQLL
APWLPSGIAI QGILSGQSTG KLLPGRQLIA DGRITVTGGQ IATDKEQGQI TVPVQNAELN
WNWRGEELSG QTEVQLGDYG HLNGSFRLPI PARMPVKPAQ QGALDIIIDG RSTELGLFAA
LMPGAVQESR GRVEIKLRGD GTWQQPQLNG QVQLLEAGAY LPIAGLELQK VNILARLDGD
RILLDNLSLQ SGKGTLRGKG SLQLHDWKPG NYNVTLKGQG VQLVNLPEIQ IQADPDLLIT
GSTSELKVTG TVKLSEVMIR DNKKPSLITP SDDVVMVGEQ SPEKPSAEFP IQADIRLLLG
DHVLVKASGL DARLTGELHL SSIDSNALTA NGRIAVAEGM YAAYGTRLDI TRGNLLFNGP
LAQPTLDIVA LRTVGKIKAG VQVSGTPRLP VVKLTSEPAM SDSDRLAYIV LGRASARNAG
EADLLMTAGG LLLSQGESVV MRDRLKRQLG VDVLGFETGS ATGQDDVSSS MLTIGKYLSP
SLYVSIGQSL FANTQEFRLR YSLGKHWQLE STTGEESGVD LYYKIEFR