Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0181 |
Symbol | |
ID | 3722994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 227671 |
End bp | 229920 |
Gene Length | 2250 bp |
Protein Length | 749 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637749758 |
Product | two component signal transduction histidine kinase/response regulator hybrid |
Protein accession | YP_355612 |
Protein GI | 77917797 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAC CATCCCTCTA TCAGCGGCTT TTCTCCGATA TTTCCGACCT GCTTGCTGTC GTCGATCGTA ATCACCGCCT TGTCATGTGC AACTGGCGCG GGGGGTACGA TTATGTTCCC GAGGACAAAA GAACGGGACA GCCCCACTGC TACGAGGTCT TTTATCCCGG GCAGAACGGA CCCTGTCAGC CTTGTCACGT GATGGAGGTT TTCCGTACCG GAAAACCCCT GGTTACCGAG AAATATAATG CCCGCGTCGG TCATCTGGAG GTTCGCTGTT TTCCCATCTT CGACGAGGCC GGCGAGCTTA CCATGGTTGC GGAACAACTT TGCGATATCA ATCAGCGTAA AGCCGCGCTG GAAAACCTGC ATGCCAGCGA AAGGCAATAC CGGACCCTGG TCGAAAGTCA GATCGACCTG GTTTGTCGTT GGCAACCCGA TACCACCCTT ACCTTTGTCA ATTCCGCCTA TTGCCGGTTT TTCGGCAAAA CCCGCGCCGA ATTGCTCGGC ACCCGATTCC TCGATAACTG CCCGCAAGAG TTCCGCCCTG ACCTTGCCGC CCATGTGGCT TCGCAAGCTC AAAATCCGAG GCTGGAGGTC GTGGAAGTCA AGGTATACGA CACCAAAGGC CGGATCCGTT GGCAAAGCTG GTGCGATTGT CCGATTTTTG ATGAGCAGGG ACGTCTGGTG GAATTTCAAT CGGTGGGCCG GGACATCACC AAAGAAAAAA TGGCCCTGGA GCACTTGCGC GAAACCCAGA CCCGTTACCG GCACTTTTTT GAAAACGATT TGACGGGGGA TTTCGTGGTC GGCATCGACG GACAGCTGGT CGACTGCAAC CCAGCCTTTT TGCGCATTTT CGGTTTCGAT TCACGGCAAC AGGCCTTGGA GAAAGACTTC TTCGAGTTGT TCTTTCACGG CAAGGATCCC GGGATCTTTT TTGAGATTCT TCAGCAGCAG AAAAAGATGG AGTATTGCGA CATCGAAGGC TGTAAATGCG ACGGCAGCCC TTTGCAGCTC ATCGCCAATC TGCTTGGGCA ATTCAACGAA GAGGGGCAAC TTACGGGCAT CGAAGGGTTT TTGTTCGATA ACACCGACCT TAAAAATCTA CAGAAACAGT TTCTCCACGC GCAGAAGATG GAAGCCATGG GACGCCTGGC CGGCGGGGTG GCCCACGATT TCAACAATCT TCTGACGGTG ATCAGCGGTT ACAGTCAGTA TCTGTTGCAG AAATATTCGG ATGAAGCGCT GCAGGGTTGT CTGGAGCAGA TCGTCAAGGC GGGCGAGCAG GCCGCTTCGC TGACCAGTCA GCTGCTGGCC TTCAGTCGGC GCCAGGTCAT GCAGACCAAA GAGATGGACC TCAATGGGGT CACGGCCGAT ATGGAAAAAA TGTTGCACCG GATTCTCGGT GCCGATGTCG ACCTGGTAGT GCTGCGGGAT CCCCGTCTGG GGCTGGTCAA CGCCGATCGC GGCCAGATCG AGCAGGTGAT CGTCAACCTG GCCGTGAATG CGCGCGATGC CATGCCCGAG GGTGGCAAAC TGACTATCGA AACCATCAAT ATCGAGCTGG ATGAAATCTA TTCCACCTGG CATACCGGTC TGGCGCCCGG TCATTATGTC ATGATGTCCG TTACCGATAC CGGCATCGGT ATGGATCCCG AAATCATGGG CAAGATTTTT GAACCCTTCT ATACCACCAA GGAAACCGGC AAAGGCACCG GCCTGGGGCT GTCCACGGTT TACGGCATCG TGCAGCAAAG CGGGGGGCAC ATTTATGTGT ACAGCGAGCC GGGTATGGGT ACGACTTTCA AGATTTATCT GCCGCGCGTC GACAGTCCGG TCCATGACCG TGCCGCCAAG GAATGTAGCA GTTTACCCAT CAAGGGCAGT GAAACCATTC TGCTGGTGGA AGATAACGAG TCCGTCCGGG ATCTTGCTCA CATGGTTCTG CGCGGTAACG GTTATAATGT CCTGGAAGCT TGCGATATCC ATGAGGCGTT GCAGGTTTTT GAAACCTATG ACGACGCCAT TCATCTGCTG CTGACCGACG TTGTCATGCC CGGTGGCAGC GGCCCGACCC TGGTGGCAGA GTTGCGAGGC CGCAAGGCCG ATCTCAAGGT TCTTTATGTG TCCGGTTATC CGCAGGACAC TCAGGCCATT CAGGATTCTG AAACCAGCAA GGACGCCTTT CTGGCCAAGC CTTTCACCCC GATATCCCTG GGGCTGAAAG TGCGGGAGAT TCTCGGCTAG
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Protein sequence | MTKPSLYQRL FSDISDLLAV VDRNHRLVMC NWRGGYDYVP EDKRTGQPHC YEVFYPGQNG PCQPCHVMEV FRTGKPLVTE KYNARVGHLE VRCFPIFDEA GELTMVAEQL CDINQRKAAL ENLHASERQY RTLVESQIDL VCRWQPDTTL TFVNSAYCRF FGKTRAELLG TRFLDNCPQE FRPDLAAHVA SQAQNPRLEV VEVKVYDTKG RIRWQSWCDC PIFDEQGRLV EFQSVGRDIT KEKMALEHLR ETQTRYRHFF ENDLTGDFVV GIDGQLVDCN PAFLRIFGFD SRQQALEKDF FELFFHGKDP GIFFEILQQQ KKMEYCDIEG CKCDGSPLQL IANLLGQFNE EGQLTGIEGF LFDNTDLKNL QKQFLHAQKM EAMGRLAGGV AHDFNNLLTV ISGYSQYLLQ KYSDEALQGC LEQIVKAGEQ AASLTSQLLA FSRRQVMQTK EMDLNGVTAD MEKMLHRILG ADVDLVVLRD PRLGLVNADR GQIEQVIVNL AVNARDAMPE GGKLTIETIN IELDEIYSTW HTGLAPGHYV MMSVTDTGIG MDPEIMGKIF EPFYTTKETG KGTGLGLSTV YGIVQQSGGH IYVYSEPGMG TTFKIYLPRV DSPVHDRAAK ECSSLPIKGS ETILLVEDNE SVRDLAHMVL RGNGYNVLEA CDIHEALQVF ETYDDAIHLL LTDVVMPGGS GPTLVAELRG RKADLKVLYV SGYPQDTQAI QDSETSKDAF LAKPFTPISL GLKVREILG
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