| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0172 |
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| Symbol | |
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| ID | 3722985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 216528 |
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| End bp | 217325 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637749749 |
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| Product | catalytic LigB subunit of aromatic ring-opening dioxygenase |
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| Protein accession | YP_355603 |
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| Protein GI | 77917788 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00000000152597 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAGA TCCCCAAAGC GCTATTTATC TCTCATGGCG GCGGTCCGTT ACCTCTTATC
GGTGATCCCG GACATCGTGA AATGGTGTCA TGCCTGGAAA AGATTGCTGC GCAAATACCC
AAACCCGATG CTCTGCTGGT GGTAAGTGCG CATTGGGAAG AGAAGATCCC GACCATTACG
TCCGGGCAGA GTCCATCTTT GATCTATGAC TACTACGGGT TTCCGGAGGA ATCCTATGCT
ATCCGGTATC CCTGTGCAGG TGAGCCATCT TTGGCTGGCG AGATCCATAA TGTGCTGGAG
AACTCCGGTA TTGAAGCGAA ATTAGATGCT ATGCGGGGAT TCGATCACGG TTTGTTTGTA
CCGCTCAAGA TAATGTATCC GGAAGCTGAT ATCCCCTGTG TCCAGTTATC TCTGGTGAAC
ACACTCGACC CTTCTCATCA CCTTAAAATC GGCCGAGCGC TTCAGTCACT TAACCGGCAG
AACGTATTGG TGCTTGGTTC GGGTTTTTCC TTTCATAATT TAAGGGCTTT TTTTGCAGCC
GATACCCCTG AATCTCAAGA GTTGAACTAT TCTTTTGATG AATGGTTGTT GAAAACGTGT
TGTAGTTCAA ATTTTCCGGA AGAGGAGAGA GCGAAGAGAC TTGTCCACTG GGCCGATGCC
CCTGGTGCGC GCTTCTGCCA CCCCCGAGAG GAACATCTGC TGCCTCTTCA CATATGTTAC
GGGGTGGCCC GGACACCATG TTCCGATTGT TTTGAACTCA AAATCATGAA CAAAAAAGCA
AGCATGTACC TGTGGTGA
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| Protein sequence | MAQIPKALFI SHGGGPLPLI GDPGHREMVS CLEKIAAQIP KPDALLVVSA HWEEKIPTIT
SGQSPSLIYD YYGFPEESYA IRYPCAGEPS LAGEIHNVLE NSGIEAKLDA MRGFDHGLFV
PLKIMYPEAD IPCVQLSLVN TLDPSHHLKI GRALQSLNRQ NVLVLGSGFS FHNLRAFFAA
DTPESQELNY SFDEWLLKTC CSSNFPEEER AKRLVHWADA PGARFCHPRE EHLLPLHICY
GVARTPCSDC FELKIMNKKA SMYLW
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