Gene Pcar_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_0148 
Symbol 
ID3722961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp187286 
End bp188335 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content58% 
IMG OID637749725 
ProductABC-type Fe3+-hydroxamate transport system, periplasmic component 
Protein accessionYP_355579 
Protein GI77917764 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0440522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGGTTT TGATGAGAAA AAGCATGCTG CGATTTTTTT GCCTGATAGT GGCTTTGCTG 
CTGACGGTAT CCGGGGCGCA AGGGCGCACG ATTACCGATA TGGCCGGCCG GCAGGTGCAG 
GTGCCCGATC ATATCCATCG GGTGCTCGGT GCGGTGTCGC CGGTAACCTG GATGATCTAT 
GCCCTCGATC CGAGGCTGTT GGCAGGGATC AACTCGGCTT TGTCCCATGA AGATTGGGAC 
TATCTGGACC CTTATGTGAA GGCTTTGCCG GTGATGGGCG GGTTTGGCGG GACGCGGGGG 
GTTAACCGGG AGACGCTGCT GGCTTTGCGG CCTGACGTGG TGATTTTCTG GGGGTGGAAC 
CGGGCGGCGG TGAATCGACG TTTGGCGCAA CAGTTGGAGG GATGGGGTGT CCCGGTGGTT 
TTCGTGGATC TGGATCGCTT TGATCGGTAT GGGGCCGCAT TGCGGTTTCT GGGCGATTTG 
CTGGACAGAG AGGAGCGCGC CGAGCAACTG GCGGCATATG GCGAACGGGC GCTGGCCGCC 
GTGTGTGCAG CGACGGCGGA TATCCCTGAT GACGAGCGGG CGCGAGTCTA TTATGCCGAA 
GGGATGGACG GCCTGGAGAC GGAACCGCAG GATTCCTTTC ATGCCGAGTT GATTCCCCTT 
GCGGGCGGCA GCAATGTCCA TCGGGGCACG TTGAAGCATT ACCGCGGGCG CGACAAGCTC 
AGTCTGGAGC AGGTATTGCT CTACGATCCC GAGGTGATAC TGGTACAGGA AAATGTTTTT 
TTCGAAGCGG TAAAAACCGA CGCGCGCTGG CAAAAAGTGC AGGCGGTCCG CGACGGCAGG 
GTCTGGCTTG TTCCGGATAT GCCTGCCAAC TGGTTCGACC GGCCGCCATC GTTCATGCGG 
TATCTGGGCT TGCAGTGGTT GGCCCATCAA CTCTATCCAA AGCGCTTTCC TTTGGATCTG 
AAGACGGAAA CGAGGGAGTT CTACAAACGG TTTCTGGGAA CAGCACCGGA TGACGAGCAG 
CTGAAAAAAA TTCTGGGTTC AGCGGGATAG
 
Protein sequence
MAVLMRKSML RFFCLIVALL LTVSGAQGRT ITDMAGRQVQ VPDHIHRVLG AVSPVTWMIY 
ALDPRLLAGI NSALSHEDWD YLDPYVKALP VMGGFGGTRG VNRETLLALR PDVVIFWGWN 
RAAVNRRLAQ QLEGWGVPVV FVDLDRFDRY GAALRFLGDL LDREERAEQL AAYGERALAA 
VCAATADIPD DERARVYYAE GMDGLETEPQ DSFHAELIPL AGGSNVHRGT LKHYRGRDKL 
SLEQVLLYDP EVILVQENVF FEAVKTDARW QKVQAVRDGR VWLVPDMPAN WFDRPPSFMR 
YLGLQWLAHQ LYPKRFPLDL KTETREFYKR FLGTAPDDEQ LKKILGSAG