| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0136 |
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| Symbol | |
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| ID | 3722931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 168727 |
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| End bp | 171066 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637749714 |
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| Product | putative type II secretion system protein |
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| Protein accession | YP_355568 |
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| Protein GI | 77917753 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCT CCTTTTTTTG GCTTCTGAGT CTCGTCATCG TTTTACTTTT CTGCCTCTCT
GGTTGCGCCG CCAAAGCTTT TCGCGATGGC AATATGGCTC TTCAGGGGGG GGATTACGAC
GAGGCGGTGG CAGATTTCCA ACATGCAGCG GAAAAACGTC CGGAAAAGCA TGAATACCGG
ATGTATCTGC AAAGAGCGAA AATCCAGACG GCCCTGTTTC ACCTTCACCA GGGTAGACAA
TTCCGGGTAG AAGGCGATCT TGATAGGGCC TTGCAGGAAT TCCAGCTGGC GTTAATTTTC
GATCCCAGCC TTGAAGCGGC AGTCCAGGAA TCTCTTGCCA TCCAAAAGGC TCAGCAAGGC
GACAAAGCAT ATAAGCAAGC TGAAGTTCTG TTTAGAAACG GGGAGTTTGA TAAGGCTCGG
TCATTGCTGC TCAAGCTTCT TGAAGCAGAC CCCGGAAATC TCCAAGCTAA AACTCTGACG
GAGAAACTGG ATGAACGGTT AACGATTTCG GGCCACCGCT TGAAACACCT GTTCAATAGT
TCCAAACCGG TATCTCTGGA ATTCAAGCAA ACCGATATTC GCGAAGTGTT CGAGATTTTT
TCCCAACTGG CGGGAATAAA TTTTGTTCTT GACGAAGATA TTCCTATGGA AATGATCGAT
CTGGAATTGA AAGACAGCTC TCTGCTGCAG GGCCTTGAGC TTTTGCTTAA TATTTACAAA
CTTCATGCAA AACCGCTGAA CGATAAATCC GTGCTTATTT ATCCGAACTC GACTGATAAA
ACCAGGCAAT ATGACGACTA TAAGATTAAA ACATATTACC TCTCCCATAT TTCGGCAAAG
CATGCAGTTA ACCTTCTTCG GACGATGCTG AAGATAAACA ACCTATTCGT CCACGAGGAG
CGCAATGCAT TAGTATTTCG CGAGCGCCCA GAGGTCATCC AACTGGCGGA ACAGATCCTC
GACGCCAATG ACCGGGCCGA TTCGGAGGTA CTTTTCGAAC TGGAACTGAT CGAGGTCAGC
CATTCGGACA ATTGGAAGTT CGGACCGTCC CTGAATCCCA ATTCCGTCAG CCTAGGTCTG
GCCAAAGGTG GTAACATCGT CGCATCTGGC CTGAGCGCTG GTGATGCAAC CACCAATCTT
GTCCAATCCT TCAGCAGTTT GGAAAGTGTC TACACCCTGC CGACTGTGGT GTTTGACCTC
CAGAAAACCC TGGTCGATTC CGAAATCCTC GCGACACCGA GGATACGGGT GAAAAACCGG
GAAAAAGCCA ATGTTCACGT CGGTAATCGG GAACCGGTGA TCACCGTTAC GACGACCGGG
GAAACCTCGA CAGACAATAT CCAATACGTC GATGTCGGGG TAAAATTGGA TATCGAACCA
AAGATTCAGC TCGATGACAC GGTGGTTACC AATTTGAGCT TGGAGGTAAG TGGTGTTACT
GAAAAAAACA CCACTGCCAA CGGTTCGTTG GCTCTCAGTA TCAGCACGAC CAAAGCCCAG
ACCACTCTGA CTTTGAAGAA CGGCGAACGG ACGGTAATCG GTGGGCTGAT TCGGGACGAT
AGTACCAAAA CCCGTAAAAT CATCCCTCTA CTCGGGGATC TGCCGCTGAT CGGGCGTCTG
TTCACCAACC ACAACAAAGA CAAAAAAAAG CGGGAAATCC TCTTGTCCAT CACCCCTCAC
ATTCTGCAGA ACGTCGATCT TCCGGACCGG ACGTTGACCG ATATCTGGTC TGGAAGCGAG
GAAGAGTTAA AGACGGCAGC GAATTTCGCC TCTTTCCAAA TACCTGTGGA GCCTGTTGCA
GAGGAATCCT CGGGACAGAC AATGGTAAGG GAGCTAAACA ATCCTCTTGA CGAGCCCTCA
GGAAACGGGG CGGAGCAGAC CCTCACCCAG GAGGAGTCGA TCGTTGAACC TCCTTCTCCA
GCTGTTTCCA CAACCGGTCA AATGCGCTTT TTATTGACAG CGCCCCCAAC AATCGCCGTT
GGCGAAACCT TTGAAGTGCT TATTGACATC ACGGATGCTT CGGACCTGTA CAGCGCTTCT
ATGAACCTAT CCTGCAACGA TAACCAGATG GAGGTGATGG AAATAATTCA AGGAGGGTTT
TTCGAAAAGG AAGCCCATTT TTCTTCCCGG CGAGACCCAG AAAACAGGGG CTATGTCATC
GACTTCCGTC TCCCTGAAAG CCAGGTGGGG GCTTCGGGTG ATCGCAATCT GGCTAAACTC
TTTTGTAAAG CAATAAATAC CGGAGATGTA TTACTTCGCG TTGCAGGCCA GAACCTTCGA
GACAGCCAAG GAAGAATGAT CGCGATACCA GCCCAGGAAA TTATTATCAA CATCGAGTAG
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| Protein sequence | MKLSFFWLLS LVIVLLFCLS GCAAKAFRDG NMALQGGDYD EAVADFQHAA EKRPEKHEYR
MYLQRAKIQT ALFHLHQGRQ FRVEGDLDRA LQEFQLALIF DPSLEAAVQE SLAIQKAQQG
DKAYKQAEVL FRNGEFDKAR SLLLKLLEAD PGNLQAKTLT EKLDERLTIS GHRLKHLFNS
SKPVSLEFKQ TDIREVFEIF SQLAGINFVL DEDIPMEMID LELKDSSLLQ GLELLLNIYK
LHAKPLNDKS VLIYPNSTDK TRQYDDYKIK TYYLSHISAK HAVNLLRTML KINNLFVHEE
RNALVFRERP EVIQLAEQIL DANDRADSEV LFELELIEVS HSDNWKFGPS LNPNSVSLGL
AKGGNIVASG LSAGDATTNL VQSFSSLESV YTLPTVVFDL QKTLVDSEIL ATPRIRVKNR
EKANVHVGNR EPVITVTTTG ETSTDNIQYV DVGVKLDIEP KIQLDDTVVT NLSLEVSGVT
EKNTTANGSL ALSISTTKAQ TTLTLKNGER TVIGGLIRDD STKTRKIIPL LGDLPLIGRL
FTNHNKDKKK REILLSITPH ILQNVDLPDR TLTDIWSGSE EELKTAANFA SFQIPVEPVA
EESSGQTMVR ELNNPLDEPS GNGAEQTLTQ EESIVEPPSP AVSTTGQMRF LLTAPPTIAV
GETFEVLIDI TDASDLYSAS MNLSCNDNQM EVMEIIQGGF FEKEAHFSSR RDPENRGYVI
DFRLPESQVG ASGDRNLAKL FCKAINTGDV LLRVAGQNLR DSQGRMIAIP AQEIIINIE
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