Gene Pcar_0109 details

Gene Information

• Locus tag: Pcar_0109
• Symbol: hrcA
• ID: 3722904
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 132059
• End bp: 133132
• Gene Length: 1074 bp
• Protein Length: 357 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637749688
• Product: heat-inducible transcription repressor HrcA
• Protein accession: YP_355542
• Protein GI: 77917727
• COG category: [K] Transcription
• COG ID: [COG1420] Transcriptional regulator of heat shock gene
• TIGRFAM ID: [TIGR00331] heat shock gene repressor HrcA

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00000000620435
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCGGC TTGTTTTACG ATTGAGTCTC GCGATGAATG AAGAGTTGAG CGAACGCTGT 
CGCCAGATAC TTGAAGCCAT TATCGAGGAC TACATCCTGT CGGGGGAACC GGTCGGTTCA 
CGCGCCCTTA CGCGGCGCCA CAACATCGCC CTGTCTCCGG CAACAGTCCG CAACGTCATG 
GCCGACCTGG AAGAAATGGG CTACCTGGAG TCCCCTCACA CCTCGGCCGG GCGCGTCCCT 
ACCGAAAAGG GCTACCGTTT CTATCTGGAC AGCCTGCTGC GTATCAAGCA GTTGTCCCCC 
AGAAAGCGTC AATCGATCCG CGACCACTAC AGTCATCGCG GCCTGCGCAT GGAAGAATTG 
CTGCGCGAAG CCGGACGCAT TCTGTCGGAC ACCTCCAGCT ATACCGGGGT AGTGATGGTG 
CCCCACCTGA CATCGACGAT CTGCCGTCGC ATCGATTTCG TGCGTCTTTC GGCCCGCCGC 
ATACTGGTGG TGTTCGTCAG TCAGACCGGC ATTGTCGAAC ATAAGATCAT CGAATCGGAC 
GTTCCGCTTT CCGAAACCGA GTTGCAGGAA GCGACCAATT ATCTCAACCA GAACTTTTCC 
GGGCTTGCCA TTCAGGAAAT CAAGCAGCAT ATCGTAGCGC ATATGGCCGA AGAAAAAGCC 
ATCTACGACA CCTTGCTGCG GCGCACCCTG CAGCTCTCCA GTCTGGCCCT GGAAGACGAC 
CTGGGCGGTC AGATCTTTAT CGAGGGCGCT TCCAACATCC TCGACCAGCC CGAATTCAAC 
GATCTGAATC GCATGAAACG ATTGATGCGG ACCTTTGACC AGAAAAATCT GCTGGTCGAT 
CTTCTGCATA AAAGCCAGTT GACCGAAGGG GTGCAGATCT ATATCGGCAG CCCGGACCAT 
TACAGCGATA TCGAAGGATG CAGCCTGGTT ACGGCCTCGT TTTCCAGCCG CTGGGGCGCC 
ACCGGTACCC TGGGTATCAT AGGCCCGACC CGCATGCCCT ACTCAACGGT CATTCCGTTG 
GTGGACTTCA CCGCCGGCCT GGTCGCAAGC ATCCTTGACA GCGAAGACGA ATAG 

 

Protein sequence

MSRLVLRLSL AMNEELSERC RQILEAIIED YILSGEPVGS RALTRRHNIA LSPATVRNVM 
ADLEEMGYLE SPHTSAGRVP TEKGYRFYLD SLLRIKQLSP RKRQSIRDHY SHRGLRMEEL 
LREAGRILSD TSSYTGVVMV PHLTSTICRR IDFVRLSARR ILVVFVSQTG IVEHKIIESD 
VPLSETELQE ATNYLNQNFS GLAIQEIKQH IVAHMAEEKA IYDTLLRRTL QLSSLALEDD 
LGGQIFIEGA SNILDQPEFN DLNRMKRLMR TFDQKNLLVD LLHKSQLTEG VQIYIGSPDH 
YSDIEGCSLV TASFSSRWGA TGTLGIIGPT RMPYSTVIPL VDFTAGLVAS ILDSEDE